Job Description P0AGC5 Confidence 98.24% Date Thu Jan 5 11:28:45 GMT 2012 Rank 64 Aligned Residues 228 % Identity 7% Template c1p99A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pg110; PDBTitle: 1.7a crystal structure of protein pg110 from staphylococcus2 aureus Resolution 1.70 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		E	L	R	V	S	T	I	H	T	P	L	T	Y	N	E	I	N	G	K	P	F	G	L	D	Y	E	L	A	K	Q	F	A	D	Y	L	G	V	K	L	K	V	T	V	R	Q	N	I	S	Q	L	F	D	D	L	D	N	G	N	A	D	L	L	A	A	G	L	V	.	.	.	.	.	Y	N	S	E	R	V	K	N
Query Conservation																																																																					.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	T	I	G	V	A	S	N	D	T	K	A	W	.	.	.	.	.	.	.	.	.	.	.	E	K	V	K	E	L	A	K	K	D	D	I	D	V	E	I	K	H	F	S	D	Y	N	L	P	N	K	A	L	N	D	G	D	I	D	M	N	A	F	Q	H	F	A	F	L	D	Q	Y	K	K	A	H	K	G	T
Template Known Secondary structure								S	S	S						.	.	.	.	.	.	.	.	.	.	.								G	G	G	T									S	S	T	T	S							T	T	S	S	S																		T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.												.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																				.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Q	P	G	P	T	Y	Y	S	V	S	Q	Q	L	V	Y	K	V	G	Q	Y	R	P	R	T	L	G	N	L	T	A	E	Q	L	T	V	A	P	G	H	V	V	V	N	D	L	Q	T	L	K	E	T	K	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	S	W	K	V
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		K	I	S	A	L	S	T	T	V	L	A	P	L	G	I	Y	S	D	K	I	K	D	V	K	.	.	K	V	K	D	G	A	K	V	V	I	P	N	D	V	S	N	Q	A	R	A	L	K	L	L	E	A	A	G	L	I	K	L	K	K	D	F	G	L	A	G	T	V	K	D	I	T	S	N	P	K	H	L	K	I
Template Known Secondary structure																			S	S		S		G	G	.	.	G			T	T								S														T	T	S					T	T			T	T			G	G	G					T	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		D	D	K	K	G	S	A	E	L	M	E	D	V	I	E	G	K	L	D	Y	T	I	A	D	S	V	A	I	S	L	F	Q	R	V	H	P	E	L	A	V	A	.	.	.	L	D	I	T	D	E	Q	P	V	T	W	F	S	P	L	D	G	D	N	T	L	S	A	A	L	L	D	F	F	N	E	M	N	E	D	G
Query Conservation																																											.	.	.
Alig confidence														.	.	.																											.	.	.
Template Conservation														.	.	.
Template Sequence		T	A	V	D	A	Q	Q	T	A	R	A	L	.	.	.	S	D	V	D	I	A	V	I	N	N	G	V	A	T	K	A	G	K	D	P	K	N	D	P	I	F	L	E	K	S	N	S	D	A	V	K	P	Y	I	N	I	V	A	V	N	D	K	D	L	D	N	K	T	Y	A	K	I	V	E	L	Y	H	S	K	E
Template Known Secondary structure						G	G	G	T	T	G	G	G	.	.	.	G	T	S	S												T	T			T	T	T	S		S						S	S	G	G	G	G	G	G								G	G	G	T	T													S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	A	R	I	E	E	K	Y	L	G	H	G	D	D	F	D	Y	V	D	T	R	T	F	L	R	A	V	D	A	V	L	P
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		A	Q	K	A	L	Q	E	D	V	K	D	G	E	K	P	V	N	L	.	.	S	K	D	E	I	K	A	I	E	T	S	L	A
Template Known Secondary structure											T	T	S	S						.	.
Template Predicted Secondary structure																				.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions