Job Description Q47534 Confidence 47.63% Date Thu Jan 5 12:36:48 GMT 2012 Rank 1 Aligned Residues 125 % Identity 22% Template d1t16a_ SCOP info Transmembrane beta-barrels Porins Outer membrane protein transport protein Resolution 2.60

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		S	I	T	A	G	Y	D	F	T	D	Y	S	G	D	H	G	N	R	N	L	A	Y	A	E	L	V	A	K	V	E	N	A	T	L	L	F	N	L	S	Q	G	R	R	D	Y	E	T	E	H	F	N	A	T	R	G	Q	G	A	V	W	Y	K	W	N	N	W	L	T	T	R	T	G	I	A	F	A	D	N	.	.
Query Conservation																																																																																.	.
Alig confidence															.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.																			.	.
Template Conservation															.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Template Sequence		A	I	H	Y	S	L	A	Y	T	S	W	S	Q	.	.	.	.	.	.	.	.	F	Q	Q	L	K	A	T	S	T	S	G	D	T	L	F	Q	K	H	E	G	F	K	D	A	Y	R	I	A	L	G	T	T	.	.	.	.	.	.	.	Y	Y	Y	D	D	N	W	T	F	R	T	G	I	A	F	D	D	S	P	V
Template Known Secondary structure												G	G	G	.	.	.	.	.	.	.	.									T	T	S																						.	.	.	.	.	.	.				S	S	S													S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300									.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.								.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
										101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																																.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																																.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	T	P	V	F	A	R	Q	D	F	R	Q	D	I	N	L	A	L	L	P	K	T	L	F	T	T	G	Y	R	Y	T	K	Y	Y	D	D	V	E	V	D	A	W	Q	G	G	V	S	L	.	.	.	.	Y	T	G	P	V	I	T	S	Y	R	Y	T	H	Y	D	S
Query Conservation		.	.	.	.	.	.	.	.																																																.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																															.																	.	.	.	.
Template Conservation																																								.
Template Sequence		P	A	Q	N	R	S	I	S	I	P	D	Q	D	R	F	W	L	S	A	G	T	T	Y	A	F	N	K	D	A	S	V	D	V	G	V	S	Y	M	.	H	G	Q	S	V	K	I	N	E	G	P	Y	Q	F	E	S	E	G	K	A	W	L	F	G	T	N	F	N	Y	A	F	H	H	H	H	H
Template Known Secondary structure			T	T	T			S	S	S																S	S	S	S											.										T	T
Template Predicted Secondary structure																																								.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions