Job Description Q47534 Confidence 3.22% Date Thu Jan 5 12:36:48 GMT 2012 Rank 87 Aligned Residues 60 % Identity 20% Template d1ohfa_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Tetraviridae-like VP Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	T	G	I	A	F	A	D	N	T	P	V	F	A	R	Q	D	F	R	Q	D	I	N	L	A	L	L	P	K	T	L	F	T	T	G	Y	R	Y	T	K	Y	Y	D	D	V	E	V	D	A	W	Q	G	G	V	S	L	Y	T	G	P	V	I	T	S	Y	R	Y	T
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.
Template Sequence		T	Y	K	S	I	T	C	E	A	N	M	P	T	L	V	D	Q	G	F	W	I	G	G	H	Y	A	L	T	P	I	.	.	.	.	.	.	.	.	.	A	T	T	Q	N	A	V	E	G	S	G	F	V	H	P	F	N	V	T	R	P	G	I	A	A	G	V	T	L	T
Template Known Secondary structure														G	G	G																.	.	.	.	.	.	.	.	.					S		S				S		B									S	S	S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270										.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions