Job Description Q47534 Confidence 3.78% Date Thu Jan 5 12:36:48 GMT 2012 Rank 61 Aligned Residues 107 % Identity 12% Template c3rfzB_ PDB info PDB header:cell adhesion/transport/chaperone Chain: B: PDB Molecule:outer membrane usher protein, type 1 fimbrial synthesis; PDBTitle: crystal structure of the fimd usher bound to its cognate fimc:fimh2 substrate Resolution 2.80 Å

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		56	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure											.																																																																					.	.
Query SS confidence											.																																																																					.	.
Query Sequence		L	L	F	N	L	S	Q	G	R	.	R	D	Y	E	T	E	H	F	N	A	T	R	G	Q	G	A	V	W	Y	K	W	N	N	W	L	T	T	R	T	G	I	A	F	A	D	N	T	P	V	F	A	R	Q	D	F	R	Q	D	I	N	L	A	L	L	P	K	T	L	F	T	T	G	Y	R	Y	T	K	Y	.	.
Query Conservation											.																																																																					.	.
Alig confidence											.																																					.	.	.	.	.																												.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		T	R	Y	S	I	T	A	G	E	Y	R	S	G	N	A	Q	Q	E	K	P	R	F	F	Q	S	T	L	L	H	G	L	P	A	G	W	T	I	Y	G	G	T	Q	L	A	D	R	.	.	.	.	.	Y	R	A	F	N	F	G	I	G	K	N	M	G	A	L	G	A	L	S	V	D	M	T	Q	A	N	S	T	L
Template Known Secondary structure														S		T	T	B															G	G	G											T	T	.	.	.	.	.														T	T
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.						.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
				133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Y	D	D	V	E	V	D	A	W	Q	G	G	V	S	L	Y	T	G	P	V	I	T	S	Y	R	Y	T	H	Y	D	S	S	D	A	G
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		P	D	D	S	Q	H	D	G	Q	S	V	R	F	L	Y	N	K	S	L	N	E	S	G	T	N	I	Q	L	V	G	Y	R	Y	S	T	S	G
Template Known Secondary structure		T	T	S																		T	T	S													T	T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions