Job Description Q47534 Confidence 9.29% Date Thu Jan 5 12:36:48 GMT 2012 Rank 24 Aligned Residues 56 % Identity 18% Template c3eebB_ PDB info PDB header:toxin Chain: B: PDB Molecule:rtx toxin rtxa; PDBTitle: structure of the v. cholerae rtx cysteine protease domain Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		A	A	A	I	F	S	A	L	P	A	Y	A	G	L	T	S	I	T	A	G	Y	D	F	T	D	Y	S	G	D	H	G	N	R	N	L	A	Y	A	E	L	V	A	K	V	E	N	A	T	L	L	F	N	L	S	Q	G	R	R	.	.	D	Y	E	T	E	H	F	N	A
Query Conservation																																																												.	.
Alig confidence												.	.	.	.									.	.	.	.	.	.																								.							.	.
Template Conservation												.	.	.	.									.	.	.	.	.	.																								.
Template Sequence		A	A	N	L	A	G	K	H	A	E	.	.	.	.	S	S	V	V	V	Q	L	D	.	.	.	.	.	.	S	D	G	N	Y	R	V	V	Y	G	D	P	S	K	L	D	G	K	L	R	W	Q	L	.	V	G	H	G	R	D	H	S	E	T	N	N	T	R	L	S	G
Template Known Secondary structure									T	G	G	.	.	.	.	G								.	.	.	.	.	.	T	T	S							S		G	G	G			S	S						.						S			T	T	S					T	T
Template Predicted Secondary structure												.	.	.	.									.	.	.	.	.	.																								.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions