 |
| Job Description | Q47534 | | Confidence | 3.42% | Date | Thu Jan 5 12:36:48 GMT 2012 |
| Rank | 80 | Aligned Residues | 19 |
| % Identity | 32% | Template | c2v4xA_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:capsid protein p27; |
PDBTitle: crystal structure of jaagsiekte sheep retrovirus capsid n-2 terminal domain
|
| Resolution | 1.5 Å |
|
| | |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
| Predicted Secondary structure | |
|  | | |  |  | | |
|
|
|
|
| | | |
| | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
P | V | F | A | R | Q | D | F | R | Q | D | I | N | L | A | L | L | P | K | T | L | F |
| Query Conservation | |
|
|
| | | | | | |
|
|
| | | | | |
| |
| | |
| Alig confidence | |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| | | | | | |
| . | . | . | | | |
|
| | |
| |
|
| Template Sequence | |
P | V | F | E | N | N | N | Q | R | . |
. |
. |
Y | Y | E | S | L | P | F | K | Q | L |
| Template Known Secondary structure | |
| | | |
| S | S |
| | . | . | . | | |
|
|
|
| | | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
1 | . | . | . | . | . | . | . | . | |
|
|
10 | . | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
