Job Description P69503 Confidence 23.31% Date Thu Jan 5 12:11:45 GMT 2012 Rank 295 Aligned Residues 115 % Identity 6% Template c3u5zM_ PDB info PDB header:dna binding protein/dna Chain: M: PDB Molecule:dna polymerase accessory protein 44; PDBTitle: structure of t4 bacteriophage clamp loader bound to the t4 clamp,2 primer-template dna, and atp analog Resolution 3.50 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		V	T	S	L	L	E	D	P	K	A	Y	A	L	S	I	D	L	L	V	E	R	Y	K	N	A	G	I	T	K	V	V	G	T	E	A	R	G	F	.	L	F	G	A	P	V	A	L	G	L	G	V	G	F	V	P	V	R	K	P	G	K	L	P	R	E	T	I	S	E	T	Y	D	L	E	Y	G	T	D	Q	L
Query Conservation																																								.
Alig confidence																													.											.																																					.	.	.	.	.
Template Conservation																													.																																																.	.	.	.	.
Template Sequence		I	D	E	C	I	L	P	A	F	D	K	E	T	F	K	S	I	T	S	K	G	K	I	P	H	I	I	.	L	H	S	P	S	P	G	T	G	K	T	T	V	A	K	A	L	C	H	D	V	N	A	D	M	M	F	V	N	G	S	D	C	K	I	D	F	V	R	G	P	L	T	N	F	A	S	.	.	.	.	.
Template Known Secondary structure		T	T	T	S																	S	S						.				S	S	S		S	S												T	T								G	G	G								T								.	.	.	.	.
Template Predicted Secondary structure																													.																																																.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		E	I	H	V	D	A	I	K	P	G	D	K	V	L	V	V	D	D	L	.	.	L	A	T	G	G	T	I	E	A	T	V	K	L	I	R	R	L	G	G	E	V	A	D	A	A	F
Query Conservation																					.	.
Alig confidence		.	.	.																	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	A	A	S	F	D	G	R	Q	K	V	I	V	I	D	E	F	D	R	S	G	L	A	E	S	Q	R	H	L	R	S	F	M	E	A	Y	S	S	N	C	S	I	I	I	T
Template Known Secondary structure		.	.	.	S			T	T										S				G	G	G														T	T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions