Job Description P69503 Confidence 37.05% Date Thu Jan 5 12:11:45 GMT 2012 Rank 180 Aligned Residues 161 % Identity 12% Template c3aerB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b; PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark Resolution 2.80 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																							.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Y	L	K	N	S	I	K	S	I	Q	D	Y	P	K	P	G	I	L	F	R	D	V	T	S	L	L	E	D	P	K	A	Y	A	L	S	I	D	L	L	V	E	R	Y	K	N	A	G	I	T	K	V	V	G	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.
Template Sequence		A	L	V	R	A	L	A	V	P	M	E	R	T	P	E	V	T	C	N	L	L	G	A	T	A	L	G	F	R	H	R	D	D	.	.	.	V	A	E	V	T	K	L	L	A	T	M	G	I	K	V	N	V	C	A	P	L	G	A	S	P	D	D	L	R	K	L	G	Q	A	H	F	N	V	L	M	Y	P	E	T
Template Known Secondary structure															S	S										T	T		T	T					.	.	.										T	T	T									T	T							T	T	G	G	G	S	S
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.													.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	L	F	G	A	P	V	A	L	G	L	G	V	G	F	V	P	V	.	.	.	.	.	.	.	.	.	.	.	.	R	K	P	G	K	L	P	R	E	T	I	S	E	T	Y	D	L	E	Y	G	T	D	Q	L	E	I	H	V	D	A	I	K	P	G	D	K	V	L	V	V	D	D	L	L	A	T	G	G	T
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		G	E	S	A	A	R	H	L	E	R	A	C	K	Q	P	F	T	K	I	V	P	I	G	V	G	A	T	R	D	F	L	A	E	V	S	K	I	T	G	L	P	V	V	T	D	E	S	T	L	R	Q	P	W	W	S	A	S	V	D	S	T	Y	L	T	G	K	R	V	F	I	.	.	.	.	F	G	D	G	T	H
Template Known Secondary structure																	B							S																								T	T									S	G	G	G	G	G	G	T	T						.	.	.	.		S	S
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.					.	.	.	.	290	.
		135	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		I	E	A	T	V	K	L	I	.	R	R	L	G	G	E	V	A	D	A	A	F	I	I	N	L	F	D	L	G	G	E	Q	R	L	E	K	Q	G	I	T	S	Y	S
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		V	I	A	A	A	R	I	A	A	K	E	V	G	F	E	V	V	G	M	G	C	Y	N	R	E	M	A	R	P	L	R	T	A	A	A	E	Y	G	L	E	A	L	I
Template Known Secondary structure												T	T										S		G	G	G										T	T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions