Return to main results Retrieve Phyre Job Id

Job DescriptionP69503
Confidence26.56%DateThu Jan 5 12:11:45 GMT 2012
Rank266Aligned Residues64
% Identity17%Templatec2q9vA_
PDB info PDB header:transferaseChain: A: PDB Molecule:membrane-associated guanylate kinase, ww and pdz domain- PDBTitle: crystal structure of the c890s mutant of the 4th pdz domain of human2 membrane associated guanylate kinase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90.........100.........110..... ....120.........130.........140......
Predicted Secondary structure 













.......






Query SS confidence 
































. . . . . . .






























Query Sequence  VPVRKPGKLPRETISETYDLEYGTDQLEIHVDA. . . . . . . IKPGDKVLVVDDLLATGGTIEATVKLIRRLG
Query Conservation 
  

  
                    
    .......   
 








 

 

      
   
Alig confidence 
































.......






























Template Conservation 
 
 
   


  
 
      

 
  
   
 
   
 
  

 

 


  
      

   
    
Template Sequence  IFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAA
Template Known Secondary structure 
BTTB


SSTTS

TTS



TT
TT
TTS
Template Predicted Secondary structure 
































Template SS confidence 






































































   842.......850.........860.........870.........880.........890.........900.........910..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions