 |
Job Description | P69503 | Confidence | 48.28% | Date | Thu Jan 5 12:11:45 GMT 2012 |
Rank | 111 | Aligned Residues | 37 |
% Identity | 35% | Template | c2jilA_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:glutamate receptor interacting protein-1; |
PDBTitle: crystal structure of 2nd pdz domain of glutamate receptor2 interacting protein-1 (grip1)
|
Resolution | 1.5 Å |
|
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | I | K | P | G | D | K | V | L | V | V | D | D | L | L | A | T | G | G | T | I | E | A | T | V | K | L | I | R | R | L | G | G | E | V | A |
Query Conservation |   |
  |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|
|   |
|   |   |
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |
Template Sequence |   |
G | T | I | K | P | G | D | R | L | L | S | V | D | G | I | R | L | L | G | T | T | H | A | E | A | M | S | I | L | K | Q | C | G | Q | E | A | A |
Template Known Secondary structure |   |
|
|
|
| T | T |
|  |  |  |  |  | T | T |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  | S |
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|