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Job Description | P69503 | Confidence | 50.25% | Date | Thu Jan 5 12:11:45 GMT 2012 |
Rank | 101 | Aligned Residues | 64 |
% Identity | 17% | Template | c2h0rD_ |
PDB info |
PDB header:hydrolase | Chain: D: PDB Molecule:nicotinamidase; |
PDBTitle: structure of the yeast nicotinamidase pnc1p
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Resolution | 2.90 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
L | V | E | R | Y | K | N | A | G | I | T | . |
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K | V | V | G | T | E | A | R | G | F | L | F | G | A | P | V | A | L | G | L | G | V | G | F | V | P | V | R | K | P | G | K | L | P | R | E | T | I | S | E | T | Y | D | L | E | Y | G | T | D | Q | L | E | I | H | V | D | A | I | K | P | G | D | K | V | L | V | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
M | N | K | Y | L | E | K | H | H | T | D | E | V | Y | I | V | G | V | A | L | E | Y | C | V | K | A | T | A | I | . |
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S | A | A | E | L | G | Y | K | T | T | V | L |
Template Known Secondary structure |   |
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| T | T | T |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
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. | . | . | . | . | . | 180 | . | . | . | . | . |
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130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | D | L | L | . |
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A | T | G | G | T | I | E | A | T | V | K | L | I | R | R | L | G | G | E | V | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | D | Y | T | R | P | I | S | D | D | P | E | V | I | N | K | V | K | E | E | L | K | A | H | N | I | N | V | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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