 |
Job Description | P69503 | Confidence | 31.46% | Date | Thu Jan 5 12:11:45 GMT 2012 |
Rank | 226 | Aligned Residues | 40 |
% Identity | 23% | Template | c2e7kA_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:maguk p55 subfamily member 2; |
PDBTitle: solution structure of the pdz domain from human maguk p552 subfamily member 2
|
Resolution | UNK |
|
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | I | K | P | G | D | K | V | L | V | V | D | D | L | L | A | T | G | G | T | I | E | A | T | V | K | L | I | R | R | L | G | G | E | V | A | D | A | A | F |
Query Conservation |   |
  |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
| . |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |
|   |
|   |
Template Sequence |   |
G | L | L | H | V | G | D | I | I | K | E | V | N | G | Q | P | V | . |
G | S | D | P | R | A | L | Q | E | L | L | R | N | A | S | G | S | V | I | L | K | I | L |
Template Known Secondary structure |   |
|
|
|
| T | T |
|  |  |  |  |  | T | T |  |  |
| . | T | T |
|  |  |  |  |  |  |  |  |  | T |
|
| S | S | B |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|