Return to main results Retrieve Phyre Job Id

Job DescriptionP69503
Confidence55.71%DateThu Jan 5 12:11:45 GMT 2012
Rank94Aligned Residues35
% Identity23%Templatec2d90A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:pdz domain containing protein 1; PDBTitle: solution structure of the third pdz domain of pdz domain2 containing protein 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120.........130.........140.........150
Predicted Secondary structure 







Query SS confidence 


































Query Sequence  IKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVA
Query Conservation     
 








 

 

      
   

 

Alig confidence 


































Template Conservation 
  

 

 


  
   
  

  

      
 
Template Sequence  LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTT
Template Known Secondary structure 

TT
SS
B
TTS
STT
Template Predicted Secondary structure 















Template SS confidence 


































   48.50.........60.........70.........80..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions