Job Description P04128 Confidence 3.11% Date Thu Jan 5 10:58:11 GMT 2012 Rank 24 Aligned Residues 79 % Identity 14% Template c3osvC_ PDB info PDB header:structural protein Chain: C: PDB Molecule:flagellar basal-body rod modification protein flgd; PDBTitle: the crytsal structure of flgd from p. aeruginosa Resolution 2.35 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	F	L	G	T	A	I	D	A	G	H	T	N	V	L	A	L	Q	S	S	A	A	G	S	A	T	N	V	G	V	Q	I	L	D	R	T	G	A	A	L	T	L	D	G	A	T	F	S	S	E	T	T	L	N	N	G	T	N	T	I	P	F	Q	A	R	Y	F	A	T	G	A	A	T	P	G	A	A	N
Query Conservation
Alig confidence																																													.	.	.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		K	V	I	V	A	T	D	K	S	V	V	D	T	K	D	T	F	K	A	S	L	N	L	P	V	S	S	S	N	V	W	V	N	V	Y	D	D	K	G	T	V	V	N	.	.	.	.	.	R	I	N	L	G	Q	Q	A	A	G	S	V	S	F	M	W	D	G	K	D	S	S	G	N	I	M	P	P	G	T	Y	K
Template Known Secondary structure								S						T	T	S									S	S												T	T	S					.	.	.	.	.									S									S	B		T	T			B			S
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		173	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	A	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions