Return to main results Retrieve Phyre Job Id

Job DescriptionP04128
Confidence99.94%DateThu Jan 5 10:58:11 GMT 2012
Rank4Aligned Residues150
% Identity33%Templatec3jwnE_
PDB info PDB header:protein binding/cell adhesionChain: E: PDB Molecule:protein fimf; PDBTitle: complex of fimc, fimf, fimg and fimh
Resolution2.69 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.........90.........100.........
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  GGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVL
Query Conservation   
 
 
 
 
   

 
        
 

 
                
 
 
                            
Alig confidence 
























































.


















..
Template Conservation 



   
 
   

 
        
 

 
                
 
    
  .      
 
 
        .. 
Template Sequence  DSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGN. AVSAVKVGFTGVADSHNAN. . L
Template Known Secondary structure 





















ST

S
S



S


S.S
S

B
SS
TT..S
Template Predicted Secondary structure 






















.











..
Template SS confidence 















































































   2.......10.........20.........30.........40.........50........ .60.........70....... .
 
   110.........120.........130.........140... ......150.........160.... .....170.........180..
Predicted Secondary structure 



















..






.



Query SS confidence 

































. .




















.

















Query Sequence  ALQSSAAGSATNVGVQILDRTGAALTLDGATFSS. . ETTLNNGTNTIPFQARYFATG. AATPGAANADATFKVQYQ
Query Conservation           
 



 
       
         ..              
      .  
 
   
 

  
 

Alig confidence 

































..




















.

















Template Conservation           
 



 
                                 
        
  
   
     
 

Template Sequence  LALENTVSAAAGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
Template Known Secondary structure 


SSSB
BS
TTS
B

TT

TTT



SSS
SSSS
B

B





Template Predicted Secondary structure 
































Template SS confidence 











































































   7980.........90.........100.........110.........120.........130.........140.........150....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions