Job Description P04128 Confidence 23.65% Date Thu Jan 5 10:58:11 GMT 2012 Rank 16 Aligned Residues 118 % Identity 16% Template c2wmpB_ PDB info PDB header:chaperone Chain: B: PDB Molecule:papg protein; PDBTitle: structure of the e. coli chaperone papd in complex with the pilin2 domain of the papgii adhesin Resolution 2.30 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	C	A	V	D	A	G	S	V	D	Q	T	V	Q	L	G	Q	V	R	T	A	S	L	A	Q	E	G	A	T	S	S	A	V	G	F	N	I	Q	L	N	D	C	D	T	N	V	A	S	K	A	A	V	A	F	L	G	T	A	I	D	A	G	H	T	N	V	L	A	L	Q	S	S	A	A	G	S	A	T	N
Query Conservation
Alig confidence													.	.							.	.	.																		.	.		.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.							.	.	.																		.	.		.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	C	R	P	S	A	Q	S	L	E	.	.	I	K	H	G	D	L	.	.	.	S	I	N	S	A	N	N	H	Y	A	A	Q	T	L	S	V	S	.	.	C	.	.	.	D	V	P	A	N	I	R	F	M	L	L	R	N	T	T	P	T	Y	S	H	G	K	K	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S				.	.					S		.	.	.		S	S	S		T	T											.	.		.	.	.	S	S											S	S			S	S			T	T	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.							.	.	.																		.	.		.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																											.	.																	.
Query SS confidence																											.	.																	.
Query Sequence		V	G	V	Q	I	L	D	R	T	G	A	A	L	T	L	D	G	A	T	F	S	S	E	T	T	.	.	L	N	N	G	T	N	T	I	P	F	Q	A	R	Y	F	A	.	T	G	A	A	T	P	G	A	A	N	A	D	A	T	F	K	V	Q	Y
Query Conservation																											.	.																	.
Alig confidence																											.	.																	.
Template Conservation
Template Sequence		F	S	V	G	L	G	H	G	W	D	S	I	V	S	V	N	G	V	D	T	G	E	T	T	M	R	W	Y	K	A	G	T	Q	N	L	T	I	G	S	R	L	Y	G	E	S	S	K	I	Q	P	G	V	L	S	G	S	A	T	L	L	M	I	L
Template Known Secondary structure								T	T								T	T	B		S	S							S	S	S														S							S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions