Return to main results Retrieve Phyre Job Id

Job DescriptionP31460
Confidence57.40%DateThu Jan 5 11:47:50 GMT 2012
Rank382Aligned Residues53
% Identity13%Templated2j5pa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain FtsK C-terminal domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.......
Predicted Secondary structure 





















Query SS confidence 






























































Query Sequence  KTDRIVITLGKQIVHGKYVPGSPLPAEAELCEEFATSRNIIREVFRSLMAKRLIEMKRYRGAF
Query Conservation    


   
   
  
 
 

  



  

   



 





  
   


    
 
  
Alig confidence 











.........


.





































Template Conservation 
   
   
   .........   .
 
 


   










 

  




  
   
Template Sequence  LFDQAVQFVTEK. . . . . . . . . RKA. SISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNR
Template Known Secondary structure  TT.........T.T

TSB



SSS
Template Predicted Secondary structure 
.........


.















Template SS confidence 






























































   1268.1270......... 1280.. .......1290.........1300.........1310.........1320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions