Job Description P31460 Confidence 95.73% Date Thu Jan 5 11:47:50 GMT 2012 Rank 81 Aligned Residues 108 % Identity 19% Template d2g9wa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		T	L	G	K	Q	I	V	H	G	K	Y	V	P	G	S	P	L	P	A	E	A	E	L	C	E	E	F	A	.	.	.	.	T	S	R	N	I	I	R	E	V	F	R	S	L	M	A	K	R	L	I	E	M	K	R	Y	R	G	A	F	V	A	P	R	N	Q	W	N	Y	L	D	T	D	V	L	Q	W	V	L	E
Query Conservation																														.	.	.	.
Alig confidence																			.											.	.	.	.																						.	.
Template Conservation																			.																																				.	.
Template Sequence		D	L	E	R	A	V	X	D	H	L	W	S	R	T	E	P	Q	.	T	V	R	Q	V	H	E	A	L	S	A	R	R	D	L	A	Y	T	T	V	X	A	V	L	Q	R	L	A	K	K	N	L	V	L	Q	.	.	I	R	A	H	R	Y	A	P	V	H	G	R	D	E	L	V	A	G	L	X	V	D	A	L	A
Template Known Secondary structure													T		S	S			.										T	T	T																		T	T	S				.	.									S	S															T
Template Predicted Secondary structure																			.																																				.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	Y	D	P	R	L	I	S	A	M	S	E	V	R	N	L	V	E	P	A	I	A	R	W	A	A	E	R	A	T	S	S	D	L	A	Q	I	E	S	A	L	N	E	M	I
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	E	D	S	G	S	R	.	.	.	.	.	.	.	.	.	.	.	Q	A	A	L	V	H	F	V	E	R	V	G	A	D	E	A	D	A	L	R	R	A	L	A	E	L	E
Template Known Secondary structure		T	S	S	S					.	.	.	.	.	.	.	.	.	.	.											S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.												.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions