Return to main results Retrieve Phyre Job Id

Job DescriptionP31460
Confidence57.69%DateThu Jan 5 11:47:50 GMT 2012
Rank379Aligned Residues52
% Identity12%Templated2dt5a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional repressor Rex, N-terminal domain
Resolution2.16

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60........
Predicted Secondary structure 





















Query SS confidence 



























































Query Sequence  IVITLGKQIVHGKYVPGSPLPAEAELCEEFATSRNIIREVFRSLMAKRLIEMKRYRGAFV
Query Conservation 
   
   
  
 
 

  



  

   



 





  
   


    
 
  
Alig confidence 













...


.



























....






Template Conservation   
 
 
  
   
 ...  
.

 


   

   






 

  
 ....




 
Template Sequence  TYLRILEELEAQGV. . . HRT. SSEQLGGLAQVTAFQVRKDLSYFGSYGT. . . . RGVGYTV
Template Known Secondary structure  TT
...
.
TS
TT



....TTT
Template Predicted Secondary structure 


...
.






....





Template SS confidence 



























































   13......20...... ... 30.........40.........50....... ..60....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions