Return to main results Retrieve Phyre Job Id

Job DescriptionP31460
Confidence97.60%DateThu Jan 5 11:47:50 GMT 2012
Rank32Aligned Residues55
% Identity24%Templated1jhfa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LexA repressor, N-terminal DNA-binding domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40 .........50.........60....
Predicted Secondary structure 













.






Query SS confidence 



































.























Query Sequence  KTDRIVITLGKQIVHGKYVPGSPLPAEAELCEEFAT. SRNIIREVFRSLMAKRLIEMKRYR
Query Conservation    


   
   
  
 
 

  



  

   

.

 





  
   


    
 
Alig confidence 



















.....










.























Template Conservation 

  

 

       
  
.....




    
  
  

  

  

 

 
 
    
Template Sequence  RQQEVFDLIRDHISQTGMPP. . . . . TRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGA
Template Known Secondary structure  SS

.....
TT
SSTTS
SSS
Template Predicted Secondary structure 




.....












Template SS confidence 




























































   7..10.........20...... ...30.........40.........50.........60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions