 |
Job Description | P31460 | Confidence | 82.73% | Date | Thu Jan 5 11:47:50 GMT 2012 |
Rank | 239 | Aligned Residues | 54 |
% Identity | 11% | Template | c3kxeD_ |
PDB info |
PDB header:protein binding | Chain: D: PDB Molecule:antitoxin protein pard-1; |
PDBTitle: a conserved mode of protein recognition and binding in a2 pard-pare toxin-antitoxin complex
|
Resolution | 2.60 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | L | N | K | T | D | R | I | V | I | T | L | G | K | Q | I | V | H | G | K | Y | V | P | G | S | P | L | P | A | E | A | E | L | C | E | E | F | A | T | S | R | N | I | I | R | E | V | F | R | S | L | M | A | K | R | L |
Query Conservation |   |
|   |   |
|   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |   |
|
|
|
|   |   |
|
|   |   |   |
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |
|   |
|   |
|
|
| . | . |
|
|   |
|
|
|
|
|   | . |   |
|
|   |   |   |   |   |
|
|   |   |
|   |   |
|   |
Template Sequence |   |
T | S | V | V | L | G | D | H | F | Q | A | F | I | D | S | Q | V | A | D | G | R | Y | G | S | A | S | E | V | . |
. |
I | R | A | G | L | R | L | L | E | . |
E | N | E | A | K | L | A | A | L | R | A | A | L | I | E | G | E |
Template Known Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| S | S |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
. | . | . | . | . | . | 40 | . | . | |
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|