Job Description P31460 Confidence 100.00% Date Thu Jan 5 11:47:50 GMT 2012 Rank 4 Aligned Residues 199 % Identity 18% Template c3fmsA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of tm0439, a gntr transcriptional2 regulator Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	T	D	R	I	V	I	T	L	G	K	Q	I	V	H	G	K	Y	V	P	G	S	P	L	P	A	E	A	E	L	C	E	E	F	A	T	S	R	N	I	I	R	E	V	F	R	S	L	M	A	K	R	L	I	E	M	K	R	Y	R	G	A	F	V	A	P	R	N	Q	W	N	Y	L	D	T	D	V	L	Q
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		L	V	R	T	K	V	Y	N	L	L	K	E	X	I	L	N	H	E	L	K	L	G	E	K	L	N	.	V	R	E	L	S	E	K	L	G	I	S	F	T	P	V	R	D	A	L	L	Q	L	A	T	E	G	L	V	K	V	V	P	R	V	G	F	F	V	T	D	V	D	E	K	F	I	R	E	T	I	E	T	R
Template Known Secondary structure																	T	T	S	S		T	T		B			.									T																	T	S					T	T	T
Template Predicted Secondary structure																												.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	L	E	N	D	Y	D	P	R	L	I	S	A	M	S	E	V	R	N	L	V	E	P	A	I	A	R	W	A	A	E	R	A	T	S	S	D	L	A	Q	I	E	S	A	L	N	E	M	I	A	N	N	Q	D	R	E	A	F	N	E	A	D	I	R	Y	H	E	A	V	L	Q	S	V	H	N	P	V	L	Q
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	X	X	E	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	L	E	N	Y	F	D	K	I	A	G	S	E	E	L	L	E	I	K	G	E	I	D	D	V	A	A	S	A	A	R	E	I	F	D	D	S	D	E	R	L	H	K	L	F	I	R	A	S	G	N	E	L	I	I
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S						T																																					T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.																				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	S	I	A	I	S	S	L	Q	R	A	V	F	E	R	T	W	M	G	D	E	A	N	M	P	Q	T	L	Q	E	H	K	A	L	F	D	A	I	R	H	Q	D	G	D	A	A	E	Q	A	A	L	T	M	I	A	S	S	T	R	R	L	K	E
Query Conservation
Alig confidence																	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		S	L	Y	E	K	I	W	D	R	I	D	L	V	R	H	.	.	.	.	.	L	N	E	R	Y	V	V	S	N	R	E	H	K	E	L	I	E	R	I	I	S	G	D	K	E	G	A	I	E	K	L	K	E	H	L	K	N	V	E	A	E	T	I	K
Template Known Secondary structure							T										.	.	.	.	.	T																				T	T
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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