 |
Job Description | P31460 | Confidence | 85.53% | Date | Thu Jan 5 11:47:50 GMT 2012 |
Rank | 226 | Aligned Residues | 47 |
% Identity | 15% | Template | c2kfsA_ |
PDB info |
PDB header:dna-binding protein | Chain: A: PDB Molecule:conserved hypothetical regulatory protein; |
PDBTitle: nmr structure of rv2175c
|
Resolution | UNK |
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | V | P | G | S | P | L | P | A | E | A | E | L | C | E | E | F | A | T | S | R | N | I | I | R | E | V | F | R | S | L | M | A | K | R | L | I | E | M | K | R | Y | R | G | A | F | V | A | P | R |
Query Conservation |   |
|   |
|
|   |   |
|
|
|
|   |   |
|
|   |   |   |
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|   |
|
|
|
|
|   |   |   |
|   |   | . | . | . |   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |   |   |
|
|
|   |
Template Sequence |   |
L | D | P | D | E | P | T | Y | D | L | P | R | V | A | E | L | L | G | V | P | V | S | K | V | A | Q | . |
. |
. |
Q | L | R | E | G | H | L | V | A | V | R | R | A | G | G | V | V | I | P | Q | V |
Template Known Secondary structure |   |
S |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  | . | . | . |  |  |  | T | T | S |
|
|
|  |  |  | T | T |  |  |  |  |  | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|