Return to main results Retrieve Phyre Job Id

Job DescriptionP37671
Confidence96.75%DateThu Jan 5 11:56:42 GMT 2012
Rank142Aligned Residues88
% Identity16%Templated1r7ja_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Archaeal DNA-binding protein
Resolution1.47

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  QSLFRGLMLIEILSNYPNGCPLAHLSELAGLNKSTVHRLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIHI
Query Conservation   

 


 


 

      
  


  


  


 


 

   
 
 
      
 

     

            
Alig confidence 













...


































..

























Template Conservation 

 


 


    ...     
 
   


       

  
   


   ..   
 




   
  
         
Template Sequence  SKLEIIQAILEACK. . . SGSPKTRIMYGANLSYALTGRYIKMLMDLEIIRQE. . GKQYMLTKKGEELLEDIRKFNEMRKN
Template Known Secondary structure 
T...T
B
T

TTS..TT
Template Predicted Secondary structure 
...










..


Template SS confidence 















































































   5....10........ .20.........30.........40.........50... ......60.........70.........
 
   104.....110......
Predicted Secondary structure 
Query SS confidence 












Query Sequence  AAPHLEALNIATG
Query Conservation      
  
   
 
Alig confidence 












Template Conservation 
  
   
   
 
Template Sequence  MDQLKEKINSVLS
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 












   80.........90..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions