Return to main results Retrieve Phyre Job Id

Job DescriptionP37671
Confidence94.97%DateThu Jan 5 11:56:42 GMT 2012
Rank199Aligned Residues52
% Identity12%Templated1dpua_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain C-terminal domain of RPA32
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31..... ...40.........50.. .......60.........70.........80..
Predicted Secondary structure  ..






.











Query SS confidence 





. .















.





























Query Sequence  MLIEIL. . SNYPNGCPLAHLSELA. GLNKSTVHRLLQGLQSCGYVTTAPAAGSYR
Query Conservation   


 
..
      
  


  
.

  


 


 

   
 
 
      
 
Alig confidence 





..















.





























Template Conservation   

  
 
     

 
 

   
       
  


 
  

 






 


Template Sequence  QVLNLIKACPRPEGLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDHFK
Template Known Secondary structure 


TTTSTTS
TTS
SSTT
Template Predicted Secondary structure 


















Template SS confidence 






















































   211........220.........230.........240.........250.........260.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions