Job Description P37671 Confidence 98.80% Date Thu Jan 5 11:56:42 GMT 2012 Rank 17 Aligned Residues 184 % Identity 13% Template c2qufB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription factor pf0095; PDBTitle: crystal structure of transcription factor axxa-pf0095 from pyrococcus2 furiosus Resolution 2.80 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		L	M	L	I	E	I	L	S	N	Y	P	N	G	C	P	L	A	H	L	S	E	L	A	G	L	N	K	S	T	V	H	R	L	L	Q	G	L	Q	S	C	G	Y	V	T	T	A	P	A	A	G	S	.	.	.	Y	R	L	T	T	K	F	I	A	V	G	Q	K	A	L	S	S	L	N	I	I	H	I	A	A	P
Query Conservation																																																					.	.	.
Alig confidence									.	.																																											.	.	.
Template Conservation									.	.
Template Sequence		R	D	L	L	S	H	L	.	.	T	A	M	E	A	Y	F	S	L	L	S	S	K	V	S	V	S	S	T	A	V	A	K	H	L	K	I	M	E	R	E	G	V	L	Q	S	Y	Y	K	I	S	I	A	K	S	Y	V	F	T	L	T	P	E	M	F	W	Y	K	G	L	D	L	G	D	A	E	L	R	D	F	E
Template Known Secondary structure									.	.	T		T	T	T		S	S	S	S		S	S	S																T	T	T	S																			T	T										S
Template Predicted Secondary structure									.	.
Template SS confidence
		15	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		H	L	E	A	L	N	I	A	T	G	E	T	I	N	F	S	S	R	E	D	D	H	A	I	L	I	Y	K	L	E	P	T	T	G	M	L	R	T	R	A	Y	I	G	Q	H	M	P	L	Y	C	S	A	M	G	K	I	Y	M	A	F	G	H	P	D	Y	V	K	S	Y	W	E	S	H	Q	H	E	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																.																																														.	.	.	.
Template Conservation																																.
Template Sequence		I	S	L	S	G	L	D	T	E	P	S	T	L	K	E	M	I	T	D	F	I	K	A	N	K	E	L	E	K	V	.	L	E	A	F	K	T	I	E	S	Y	R	S	S	L	M	R	K	I	K	E	A	Y	L	K	E	I	G	D	M	T	Q	L	A	I	L	H	Y	L	L	L	N	G	R	A	T	V	E	E	L
Template Known Secondary structure					T	T	S		S				S																			.																								T	T	T			T	T												S
Template Predicted Secondary structure																																.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
							183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	I	Q	P	L	T	R	N	T	I	T	E	L	P	A	M	F	D	E	L	A	H	I	R	E	S	G	A	A	M	D	R	E	E	N
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		S	D	R	L	N	L	K	E	R	E	V	R	E	K	I	S	E	M	A	R	F	V	P	V	K	I	I	N	D	N	T	V	V	L	D	E	D	Q	I
Template Known Secondary structure						T															T	T	S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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