Job Description P37671 Confidence 100.00% Date Thu Jan 5 11:56:42 GMT 2012 Rank 5 Aligned Residues 244 % Identity 25% Template c2o0yB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator rha1_ro069532 (iclr-family) from rhodococcus sp. Resolution 2.00 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	S	Q	S	L	F	R	G	L	M	L	I	E	I	L	S	N	Y	P	N	G	C	P	L	A	H	L	S	E	L	A	G	L	N	K	S	T	V	H	R	L	L	Q	G	L	Q	S	C	G	Y	V	T	T	A	P	A	A	G	S	Y	R	L	T	T	K	F	I	A	V	G	Q	K	A	L	S	S	L	N	I
Query Conservation
Alig confidence																																																										.
Template Conservation																																																										.
Template Sequence		A	G	V	R	S	V	T	R	V	I	D	L	L	E	L	F	D	A	A	H	P	T	R	S	L	K	E	L	V	E	G	T	K	L	P	K	T	T	V	V	R	L	V	A	T	X	C	A	R	S	V	L	T	S	R	A	.	D	G	S	Y	S	L	G	P	E	X	L	R	W	V	R	L	A	G	R	T	W	A	P
Template Known Secondary structure															T	T		B	T	T	B	S												T																T	T	S					T	.	T	S						G	G	G	G	G	G
Template Predicted Secondary structure																																																										.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	I	A	A	P	H	L	E	A	L	N	I	A	T	G	E	T	I	N	F	S	S	R	E	D	D	H	A	I	L	I	Y	K	L	E	P	T	T	G	M	L	R	T	R	A	Y	I	G	Q	H	M	P	L	Y	C	S	A	M	G	K	I	Y	M	A	F	G	H	P	D	Y	V	K	S	Y	W	E	S	H	Q
Query Conservation
Alig confidence																																						.																																							.	.	.	.	.
Template Conservation																																						.																																							.	.	.	.	.
Template Sequence		P	E	E	V	V	D	I	X	R	Q	L	S	A	D	T	G	E	T	V	N	L	Y	I	R	Q	G	L	S	R	V	V	V	A	Q	C	E	.	S	T	A	T	V	R	S	V	I	P	L	G	V	P	Y	P	L	W	A	G	A	A	G	K	I	L	L	L	A	A	P	E	L	I	D	D	V	A	.	.	.	.	.
Template Known Secondary structure																	S	S									T	T										.		S		S	S						T	T					S	S	S	S							G	G	G		G	G	G						.	.	.	.	.
Template Predicted Secondary structure																																						.																																							.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	I	Q	P	L	T	R	N	T	I	T	E	L	P	A	M	F	D	E	L	A	H	I	R	E	S	G	A	A	M	D	R	E	E	N	E	L	G	V	S	C	I	A	V	P	V	F	D	I	H	G	R	V	P	Y	A	V	S	I	S	L	S	T	S	R	L	K	Q	V	G	E	K	N	L	L	K	P	L	R
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	A	D	S	P	H	G	P	E	F	A	D	Q	L	R	E	K	V	E	D	G	R	E	R	G	Y	Q	L	V	H	G	E	R	E	L	G	S	S	G	L	S	F	P	L	V	D	S	H	G	T	V	V	A	A	L	T	L	G	G	P	T	G	R	F	T	E	D	R	T	P	H	Y	I	E	C	T	R
Template Known Secondary structure		.	.	.	.			S	S	S		T	T																S	S					S	S	S	S	T	T											T	T													G	G	G	S		T	T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	A	Q	A	I	S	N	E	L	G	F	T	V	R	D
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		A	A	A	E	E	I	S	.	A	I	G	L	P	G	L	D
Template Known Secondary structure									.					T	T	T
Template Predicted Secondary structure									.
Template SS confidence
		246	.	.	.	250	.	.		.	.	.	.	.	.	.	260

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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