 |
Job Description | P37671 | Confidence | 91.90% | Date | Thu Jan 5 11:56:42 GMT 2012 |
Rank | 252 | Aligned Residues | 55 |
% Identity | 18% | Template | c2bgcA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:prfa; |
PDBTitle: prfa-g145s, a constitutive active mutant of the2 transcriptional regulator in l.monocytogenes
|
Resolution | 2.3 Å |
|
 |
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | S | L | F | R | G | L | M | L | I | E | I | L | S | N | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | N | G | C | P | L | A | H | L | S | E | L | A | G | L | N | K | S | T | . |
V | H | R | L | L | Q | G | L | Q | S | C | G | Y | V | T | T | A | P | A | A |
Query Conservation |   |
  |
|
|   |
|
|
|   |
|
|
|   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|
|
|   |   |
|
|
|   |   |
|
| . |
|   |
|
|
|   |
|
|   |   |   |
|   |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |
|
|
|
|
|   |
|   |
|
|
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |
Template Sequence |   |
G | K | L | G | S | I | C | S | Q | L | L | I | L | T | Y | V | Y | G | K | E | T | P | D | G | I | K | I | T | L | D | N | L | T | M | Q | E | L | G | Y | S | S | G | I | A | H | S | S | A | V | S | R | I | I | S | K | L | K | Q | E | K | V | I | V | Y | K | N | S | C |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |
|
| S |
|
|
|  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | T | T |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|