Job Description P37671 Confidence 100.00% Date Thu Jan 5 11:56:42 GMT 2012 Rank 13 Aligned Residues 164 % Identity 35% Template c1yspA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator kdgr; PDBTitle: crystal structure of the c-terminal domain of e. coli transcriptional2 regulator kdgr. Resolution 1.80 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	I	I	H	I	A	A	P	H	L	E	A	L	N	I	A	T	G	E	T	I	N	F	S	S	R	E	D	D	H	A	I	L	I	Y	K	L	E	P	T	T	G	M	L	R	T	R	A	Y	I	G	Q	H	M	P	L	Y	C	S	A	M	G	K	I	Y	M	A	F	G	H	P	D	Y	V	K	S	Y	W	E
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.
Template Sequence		M	D	L	I	R	S	A	D	I	Q	M	R	E	L	S	R	L	T	K	E	T	I	H	L	G	A	L	D	E	D	S	I	V	Y	I	H	K	I	D	S	.	.	.	.	.	.	.	.	.	M	I	G	R	R	N	P	L	Y	S	T	A	I	G	K	V	L	L	A	W	R	D	R	D	E	V	K	Q	I	L	E
Template Known Secondary structure																														T	T											.	.	.	.	.	.	.	.	.								S	S	S	S									T	S										T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40										.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	Q	H	E	I	Q	P	L	T	R	N	T	I	T	E	L	P	A	M	F	D	E	L	A	H	I	R	E	S	G	A	A	M	D	R	E	E	N	E	L	G	V	S	C	I	A	V	P	V	F	D	I	H	G	R	V	P	Y	A	V	S	I	S	L	S	T	S	R	L	K	Q	V	G	E	K	N	L	L	K
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		G	V	.	.	E	Y	K	R	S	T	E	R	T	I	T	S	T	E	A	L	L	P	V	L	D	Q	V	R	E	Q	G	Y	G	E	D	N	E	E	Q	E	E	G	L	R	C	I	A	V	P	V	F	D	R	F	G	V	V	I	A	G	L	S	I	S	F	P	T	L	R	F	S	E	E	R	L	Q	E	Y	V	A
Template Known Secondary structure		T		.	.						S	T	T				S															T						S	S	S	S	T	T	B										T	T	S											B	S	S	S
Template Predicted Secondary structure				.	.
Template SS confidence
		80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	R	E	T	A	Q	A	I	S	N	E	L	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	H	T	A	A	R	K	I	S	A	Q	M	G	Y
Template Known Secondary structure															T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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