Job Description P37671 Confidence 100.00% Date Thu Jan 5 11:56:42 GMT 2012 Rank 1 Aligned Residues 246 % Identity 29% Template c1mkmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:iclr transcriptional regulator; PDBTitle: crystal structure of the thermotoga maritima iclr Resolution 2.20 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	S	L	F	R	G	L	M	L	I	E	I	L	S	N	Y	P	N	G	C	P	L	A	H	L	S	E	L	A	G	L	N	K	S	T	V	H	R	L	L	Q	G	L	Q	S	C	G	Y	V	T	T	A	P	A	A	G	S	Y	R	L	T	T	K	F	I	A	V	G	Q	K	A	L	S	S	L	N	I	I	H
Query Conservation
Alig confidence																																																								.
Template Conservation																																																								.
Template Sequence		M	N	T	L	K	K	A	F	E	I	L	D	F	I	V	K	N	P	G	D	V	S	V	S	E	I	A	E	K	F	N	M	S	V	S	N	A	Y	K	Y	M	V	V	L	E	E	K	G	F	V	L	R	K	K	.	D	K	R	Y	V	P	G	Y	K	L	I	E	Y	G	S	F	V	L	R	R	F	N	I	R	D
Template Known Secondary structure			T	T															S	S		B									T	T																T	T	S					T	.	T	S						T
Template Predicted Secondary structure																																																								.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	P	H	L	E	A	L	N	I	A	T	G	E	T	I	N	F	S	S	R	E	D	D	H	A	I	L	I	Y	K	L	E	P	T	T	G	M	L	R	T	R	A	Y	I	G	Q	H	M	P	L	Y	C	S	A	M	G	K	I	Y	M	A	F	G	H	P	D	Y	V	K	S	Y	W	E	S	H	Q	H	E
Query Conservation
Alig confidence																																				.																																											.	.
Template Conservation																																				.																																											.	.
Template Sequence		I	A	H	D	H	L	V	D	I	M	K	R	T	G	E	T	V	H	L	I	L	K	D	G	F	E	G	V	Y	I	D	K	V	E	.	G	E	Q	S	I	P	M	V	S	R	L	G	M	K	V	D	L	Y	S	T	A	S	G	K	S	I	L	A	F	V	P	E	K	E	L	K	E	Y	L	K	I	V	.	.	E
Template Known Secondary structure													T	T		S									S	S										.		T	T	S				S			S	S					S	S	S	S										S													.	.
Template Predicted Secondary structure																																				.																																											.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	P	L	T	R	N	T	I	T	E	L	P	A	M	F	D	E	L	A	H	I	R	E	S	G	A	A	M	D	R	E	E	N	E	L	G	V	S	C	I	A	V	P	V	F	D	I	H	G	R	V	P	Y	A	V	S	I	S	L	S	T	S	R	L	K	Q	V	G	E	K	N	L	L	K	P	L	R	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	P	K	T	P	N	T	I	T	N	P	R	V	L	K	R	E	L	E	K	I	R	K	R	G	Y	A	V	D	N	E	E	N	E	I	G	I	M	C	V	G	V	P	I	F	D	H	N	G	Y	P	V	A	G	V	S	I	S	G	V	A	R	K	F	T	E	E	K	I	E	E	Y	S	D	V	L	K	E	K
Template Known Secondary structure					S	S	T	T																			S	S					S	S	S	S	T	T											T	T	S												G	G	G
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	A	I	S	N	E	L	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	E	I	S	R	K	L	G	Y
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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