Job Description P37692 Confidence 69.33% Date Thu Jan 5 11:57:14 GMT 2012 Rank 77 Aligned Residues 273 % Identity 12% Template d2vcha1 SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase UDPGT-like Resolution 1.45

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																								.																							.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																							.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	V	I	G	P	S	W	V	G	D	M	M	M	S	Q	S	L	Y	R	T	L	.	Q	A	R	Y	P	Q	A	I	I	D	V	M	A	P	A	W	C	R	P	L	L	S	.	.	.	.	R	M	P	E	V	N	E	A	I	P	M	P	L	G	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.																							.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.				.	.																		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		V	A	I	I	P	S	P	G	M	G	H	L	I	P	L	V	E	F	A	K	R	L	V	H	L	H	.	.	G	L	T	V	T	F	V	I	A	G	E	G	P	P	S	A	Q	R	T	V	L	D	L	P	S	S	I	S	S	V	F	L	P	P	V	D	L	T	D	L	S	S	S	T	R	I	E	S	R	I	S	L
Template Known Secondary structure								S																				.	.											S	S	S												T	T												T	T	S		T	T
Template Predicted Secondary structure																												.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
				63	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure		.	.															.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.															.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	A	L	E	I	G	E	R	R	K	L	G	H	S	L	.	.	R	E	K	R	Y	D	R	A	Y	V	L	P	N	S	F	K	S	A	L	V	P	F	F	A	G	I	P	H	R	T	G	W	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.															.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.															.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	T	R	S	N	P	E	L	R	K	V	F	D	S	F	V	E	G	G	R	L	P	T	A	L	V	V	D	L	F	G	T	D	A	F	D	V	A	V	E	F	H	V	P	P	Y	I	F	Y	P	T	T	A	N	V	L	S	F	F	L	H	L	P	K	L	D	E	T	V	S	C	E	F	R	E	L	T	E	P
Template Known Secondary structure					T	T														T	T				S						T	T		G	G	G							T	T									S																				S		G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
																															111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	R	Y	G	L	L	N	D	V	R	V	L	D	K	E	A	W	P	L	M	V	E	R	Y	I	A	L	A	Y	D	K	G	I	M	R	T	A	Q	D	L	P	Q	P	L	L	W	P	Q	L	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	M	L	P	G	C	V	P	V	A	G	K	D	F	L	D	P	A	Q	D	R	K	D	D	A	Y	K	W	L	L	H	N	T	K	R	Y	K	E	A	E	G	I	L	V	N	T	F	F	E	L	E	P	N	A	I	K	A	L	Q	E	P	G	L	D	K	P	P	V	Y	P	V	G	P	L	V	N	I	G	K	Q
Template Known Secondary structure		B			T	T				B		G	G	G	S		G	G	G	S		T	T	S													G	G	G		S					S			T	T	T	S									S			T	T														S		S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.												.	.	.	.	.	.	230
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	E	G	E	K	S	Y	T	C	N	Q	F	S	L	S	S	E	R	P	M	I	G	F	C	P	G	A	E	F	G	P	A	K	R	W	P	H	Y	H	Y	A	E	L	A	K	Q	L	I	D	E	G	Y	Q	V	V	L	F	G	S	A	K	.	.	.	.	.	.	.	.	.	.	.	D	H	E	A	G	N	E
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.																.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.																.	.	.	.
Template Sequence		E	A	S	E	C	L	K	W	L	D	N	.	.	.	.	Q	P	L	G	S	V	L	Y	V	S	F	G	S	G	G	.	.	.	.	T	L	T	C	E	Q	L	N	E	L	A	L	G	L	A	D	S	E	Q	R	F	L	W	V	I	R	S	P	S	G	I	A	N	S	S	Y	F	D	S	Q	T	D	P	L	T	F
Template Known Secondary structure												T	.	.	.	.	S		T	T								T	T	T		.	.	.	.																	T	T												S	S	T	T	T	T	T	T				S		G	G	G	G
Template Predicted Secondary structure													.	.	.	.																.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.					260	.	.	.	.	.	.	.	.	.	270	.	.	.	.					.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		I	L	A	A	L	N	T	E	Q	Q	A	W	C	R	N	L	A	G	E	T	Q	L	D	Q	A	V	I	L	I	A	A	C	K	A	I	V	T	N	D	S	.	G	L	M	H	V	A	A	A	L	N	R	P	L	V	A	L
Query Conservation																																										.
Alig confidence																														.												.
Template Conservation																														.
Template Sequence		L	P	P	G	F	L	E	R	T	K	K	R	G	F	V	I	P	F	W	A	P	Q	A	Q	V	L	A	H	.	P	S	T	G	G	F	L	T	H	C	G	W	N	S	T	L	E	S	V	V	S	G	I	P	L	I	A	W
Template Known Secondary structure		S		T	T					T	T	T	T						S										S	.	T	T																				T
Template Predicted Secondary structure																														.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions