Phyre 2 alignment of P37692 with d2acva1

Job Description P37692
Confidence 97.74% Date Thu Jan 5 11:57:14 GMT 2012

Rank 25 Aligned Residues 277

% Identity 13% Template d2acva1

SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase UDPGT-like

Resolution 2.00

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.										40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.																														.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.																														.	.	.
Query Sequence	M	K	I	L	V	I	G	P	S	W	V	G	D	M	M	M	S	Q	S	L	Y	R	T	L	Q	A	R	Y	P	Q	A	I	I	D	V	M	A	P	A	.	.	.	.	.	.	.	.	.	W	C	R	P	L	L	S	R	M	P	E	V	N	E	A	I	P	M	P	L	G	H	G	A	L	E	I	G	E	.	.	.
Query Conservation																																								.	.	.	.	.	.	.	.	.																														.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation
Template Sequence	S	E	L	I	F	I	P	A	P	G	I	G	H	L	A	S	A	L	E	F	A	K	L	L	T	N	H	D	K	N	L	Y	I	T	V	F	C	I	K	F	P	G	M	P	F	A	D	S	Y	I	K	S	V	L	A	S	Q	P	Q	I	Q	L	I	D	L	P	E	V	E	P	P	P	Q	E	L	L	K	S	P	E
Template Known Secondary structure									S	S	T	T	T														T		T	T											T	T														S		T	T														G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.

														69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	K	L	G	H	S	L	R	E	K	R	Y	D	R	A	Y	V	L	P	N	S	F	K	S	A	L	V	P	F	F	A	G	I	P	H	R	T	G	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	F	Y	I	L	T	F	L	E	S	L	I	P	H	V	K	A	T	I	K	T	I	L	S	N	K	V	V	G	L	V	L	D	F	F	C	V	S	M	I	D	V	G	N	E	F	G	I	P	S	Y	L	F	L	T	S	N	V	G	F	L	S	L	M	L	S	L	K	N	R	Q	I	E	E	V	F	D	D	S	D	R
Template Known Secondary structure										T														T	T								G	G	G	G	G	G							T	T								S	S											G	G	G	S		T	T						S	S	G
Template Predicted Secondary structure
Template SS confidence
	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

										109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																											.	.	.	.	150	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	R	G	E	M	R	Y	G	L	L	N	D	V	R	V	L	D	K	E	A	W	P	L	M	V	E	R	Y	I	A	L	A	Y	D	K	G	I	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	A	Q	D	L	P	Q
Query Conservation	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	D	H	Q	L	L	N	I	P	G	I	S	N	Q	V	P	S	N	V	L	P	D	A	C	F	N	K	D	G	G	Y	I	A	Y	Y	K	L	A	E	R	F	R	D	T	K	G	I	I	V	N	T	F	S	D	L	E	Q	S	S	I	D	A	L	Y	D	H	D	E	K	I	P	P	I	Y	A	V	G	P	L	L	D
Template Known Secondary structure	G	G						T	T		S	S				G	G	G	S							T	T	T													T	T	S	S					S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

	154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	L	L	W	P	Q	L	Q	V	S	E	G	E	K	S	Y	T	C	N	Q	F	S	L	S	S	E	R	P	M	I	G	F	C	P	G	A	E	F	G	P	A	K	R	W	P	H	Y	H	Y	A	E	L	A	K	Q	L	I	D	E	G	Y	Q	V	V	L	F	G	S	A	K	D	H	E	A	G	N	E	I	L	A
Query Conservation
Alig confidence																																						.	.	.
Template Conservation																																						.	.	.
Template Sequence	L	K	G	Q	P	N	P	K	L	D	Q	A	Q	H	D	L	I	L	K	W	L	D	E	Q	P	D	K	S	V	V	F	L	C	F	G	S	M	.	.	.	G	V	S	F	G	P	S	Q	I	R	E	I	A	L	G	L	K	H	S	G	V	R	F	L	W	S	N	S	A	E	K	K	V	F	P	E	G	F	L	E
Template Known Secondary structure	S	S				B	T	T	B														T	S		T	T									S	S	.	.	.																				T											G	G	G	S		T	T
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.				.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

	234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																													.	.										.
Query SS confidence																													.	.										.
Query Sequence	A	L	N	T	E	Q	Q	A	W	C	R	N	L	A	G	E	T	Q	L	D	Q	A	V	I	L	I	A	A	.	.	C	K	A	I	V	T	N	D	S	.	G	L	M	H	V	A	A	A	L	N	R	P	L	V	A	L
Query Conservation																													.	.										.
Alig confidence																.	.	.	.	.	.								.	.										.
Template Conservation																.	.	.	.	.	.
Template Sequence	W	M	E	L	E	G	K	G	M	I	C	G	W	A	P	.	.	.	.	.	.	Q	V	E	V	L	A	H	K	A	I	G	G	F	V	S	H	C	G	W	N	S	I	L	E	S	M	W	F	G	V	P	I	L	T	W
Template Known Secondary structure							S					S	S			.	.	.	.	.	.							S	T	T																			T	T
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
	327	.	.	330	.	.	.	.	.	.	.	.	.	340	.							.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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