Job Description P37692 Confidence 98.40% Date Thu Jan 5 11:57:14 GMT 2012 Rank 14 Aligned Residues 339 % Identity 9% Template c3oy2A_ PDB info PDB header:viral protein,transferase Chain: A: PDB Molecule:glycosyltransferase b736l; PDBTitle: crystal structure of a putative glycosyltransferase from paramecium2 bursaria chlorella virus ny2a Resolution 2.31 Å

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		1	.	.	.	.	.			.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure								.	.																																				.
Query SS confidence								.	.																																				.
Query Sequence		M	K	I	L	V	I	.	.	G	P	S	W	V	G	D	M	M	M	S	Q	S	L	Y	R	T	L	Q	A	R	Y	P	Q	A	I	I	D	V	M	A	P	A	W	C	.	R	P	L	L	S	R	M	P	E	V	N	E	A	I	P	M	P	L	G	H	G	A	L	E	I	G	E	R	R	K	L	G	H	S	L	R
Query Conservation								.	.																																				.
Alig confidence								.	.																						.	.													.
Template Conservation																															.	.
Template Sequence		M	K	L	I	I	V	G	A	H	S	S	V	P	S	G	Y	G	R	V	M	R	A	I	V	P	R	I	S	K	.	.	A	H	E	V	I	V	F	G	I	H	A	F	G	R	S	V	H	A	N	I	E	E	F	D	A	Q	T	A	E	H	V	R	G	L	N	E	Q	G	F	Y	Y	S	G	L	S	E	F	I	D
Template Known Secondary structure											T	T			S														T	T	.	.	T	S								S			S			S		S	S	S												T	T			S	T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		E	K	R	Y	D	R	A	Y	V	L	P	N	S	F	K	S	A	L	V	P	F	F	A	.	.	.	G	I	P	H	R	T	G	W	R	G	E	M	R	Y	G	L	L	N	D	V	R	V	L	D	K	E	A	W	P	L	M	V	E	R	Y	I	A	L	A	Y	D	K	G	I	M	R	T	A	Q	D	L	P	Q	P
Query Conservation																									.	.	.
Alig confidence																									.	.	.
Template Conservation
Template Sequence		V	H	K	P	D	I	V	M	I	Y	N	D	P	I	V	I	G	N	Y	L	L	A	M	G	K	C	S	H	R	T	K	I	V	L	Y	V	D	L	V	S	K	N	I	R	E	N	L	W	W	I	F	S	H	P	K	V	V	G	V	M	A	M	S	K	C	W	I	S	D	I	C	N	Y	G	C	K	V	P	I	N
Template Known Secondary structure						S																		G	G	G			S												S	B	S			G	G	G	G	G	G	G	G		T	T							S	S	T									T	T			S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	W	P	Q	L	Q	V	S	E	G	E	K	S	Y	T	C	N	Q	F	S	L	S	S	E	R	P	M	I	G	F	C	P	G	A	E	F	G	P	A	K	R	W	P	H	Y	H	Y	A	E	L	A	K	Q	L	I	D	E	G	Y	Q	V	V	L	F	G	S	A	K	D	H	E	A	G	N	E	I	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	S	H	F	V	D	T	K	T	I	Y	D	A	R	K	L	V	G	L	S	E	Y	N	D	D	V	L	F	L	N	M	N	R	N	T	A	R	K	R	L	D	I	Y	V	L	A	A	A	R	F	I	S	K	Y	P	D	A	K	V	R	F	L	C	N	S	H	H	E	S	K	F	D	L	H	S	I	A	L	R
Template Known Secondary structure													T	T					T	T		G	G	G	T	T	S							S		S	S	G	G	G	T																T	T											T	T		S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.									.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.						270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure									.	.	.	.	.	.	.	.																													.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.																													.	.	.	.	.
Query Sequence		L	N	T	E	Q	Q	A	.	.	.	.	.	.	.	.	W	C	R	N	L	A	G	E	T	Q	L	D	Q	A	V	I	L	I	A	A	C	K	A	I	V	T	N	D	.	.	.	.	.	S	G	L	M	H	V	A	A	A	L	N	R	P	L	V	A	L	Y	G	P	S	S	P	D	F	T	P	P	L	S	H	K
Query Conservation									.	.	.	.	.	.	.	.																													.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																													.	.	.	.	.																												.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		E	L	V	A	S	G	V	D	N	V	F	T	H	L	N	K	I	M	I	N	R	T	V	L	T	D	E	R	V	D	M	M	Y	N	A	C	D	V	I	V	N	C	S	S	G	E	G	F	G	L	C	S	A	E	G	A	V	L	G	K	P	L	I	I	S	A	V	G	G	A	D	D	Y	F	S	.	.	.	G	D
Template Known Secondary structure							T		S							T	T						S															S							S			S	S									T	T	T															S		.	.	.	T	T
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.				.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	V	I	R	L	I	T	G	Y	H	K	V	R	K	G	D	A	A	E	G	Y	H	Q	S	L	I	D	I	T	P	Q	R	V	L	E	E	L	N	A	L	L	L	Q	E	E
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		C	V	Y	K	I	K	P	S	A	W	I	S	V	D	D	R	D	G	I	G	G	I	.	.	.	E	G	I	I	D	V	D	D	L	V	E	A	F	T	F	F	K	D	E	K	N
Template Known Secondary structure		T	S												T	T	T		S	S				.	.	.																T	T	S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.				.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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