Job Description P37692 Confidence 98.20% Date Thu Jan 5 11:57:14 GMT 2012 Rank 19 Aligned Residues 298 % Identity 15% Template c3othB_ PDB info PDB header:transferase/antibiotic Chain: B: PDB Molecule:calg1; PDBTitle: crystal structure of calg1, calicheamicin glycostyltransferase, tdp2 and calicheamicin alpha3i bound form Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	L	V	I	G	P	S	W	V	G	D	M	M	M	S	Q	S	L	Y	R	T	L	Q	A	R	Y	P	Q	A	I	I	D	V	M	A	P	A	W	C	R	P	L	L	S	R	M	P	E	V	N	E	A	I	P	M	P	L	G	H	G	A	L	E	I	G	E	R	R	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.																						.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.																						.	.
Template Sequence		X	R	V	L	F	A	S	L	G	T	H	G	H	T	Y	P	L	L	P	L	A	T	A	A	R	A	A	.	.	G	H	E	V	T	F	A	T	G	E	G	F	A	G	T	L	R	K	L	G	F	.	.	E	P	V	A	T	G	X	P	V	F	D	G	F	L	A	A	L	R	I	R	F	D	T	D	S	P	E	G
Template Known Secondary structure										S	S					G	G	G										T	.	.	T									G	G	G							T	T		.	.						S																S		S			T	T
Template Predicted Secondary structure																													.	.																						.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
																										71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	G	H	S	L	R	E	K	R	Y	D	R	A	Y	V	L	P	N	S	F	K	S	A	L	V	P	F	F	A	G	I	P	H	R	T	G	W	R	G	E	M	R	Y	G	L	L	N	D	V	R	V	L	D	K	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	P	E	Q	L	S	E	L	P	Q	I	V	F	G	R	V	I	P	Q	R	V	F	D	E	L	Q	P	V	I	E	R	L	R	P	D	L	V	V	Q	E	I	S	N	Y	G	A	G	L	A	A	L	K	A	G	I	P	T	.	.	.	.	.	.	.	.	.	.	I	C	H	G	V	G	R	D	T	P	D	D
Template Known Secondary structure								T	T								T																				S						T	T												T				.	.	.	.	.	.	.	.	.	.						S					S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.											.	.	.	.	.	140	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																							.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	W	P	L	M	V	E	R	Y	I	A	L	A	Y	D	K	G	I	M	R	T	A	Q	D	L	P	Q	P	L	L	W	P	Q	L	Q	V	S	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	S	Y	T	C	N	Q	F	S	L	S	S	E	R	P	M	I	G
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	R	S	I	E	E	E	V	R	G	L	A	Q	R	L	G	L	D	L	P	P	G	R	I	D	G	F	G	N	P	F	I	D	I	F	P	P	S	L	Q	E	P	E	F	R	A	R	P	R	R	H	E	L	R	P	V	P	F	A	E	Q	G	D	L	P	A	W	L	S	S	R	D	T	A	R	P	L	V	Y
Template Known Secondary structure																		T					S	S			G	G	G	G							S		T	T	T	S						T		T	T																	G	G	G	G	G	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	P	G	A	E	F	G	P	A	K	R	W	P	H	Y	H	Y	A	E	L	A	K	Q	L	I	D	E	G	Y	Q	V	V	L	F	G	S	A	K	D	H	E	A	G	N	E	I	L	A	A	L	N	T	E	Q	Q	A	W	C	R	N	L	A	G	E	T	Q	L	D	Q	A	V	I	L	I	A	A	C	K	A
Query Conservation
Alig confidence												.	.	.	.																												.	.	.	.	.	.	.	.																						.	.	.
Template Conservation												.	.	.	.																												.	.	.	.	.	.	.	.																						.	.	.
Template Sequence		L	T	L	G	T	S	S	G	G	T	.	.	.	.	V	E	V	L	R	A	A	I	D	G	L	A	G	L	D	A	D	V	L	V	A	S	G	P	S	L	D	.	.	.	.	.	.	.	.	V	S	G	L	G	E	V	P	A	N	V	R	L	E	S	W	V	P	Q	A	A	.	.	.	L	L	P	H	V	D	L
Template Known Secondary structure					T	T	T	T	S			.	.	.	.													T	S	S	S							T	T	T			.	.	.	.	.	.	.	.		T	T						T	T					S							.	.	.		G	G	G		S
Template Predicted Secondary structure												.	.	.	.																												.	.	.	.	.	.	.	.																						.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.					.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.									.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.				.	.	.	.	.	290	.
		265	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure													.																								.	.	.
Query SS confidence													.																								.	.	.
Query Sequence		I	V	T	N	D	S	G	L	M	H	V	.	A	A	A	L	N	R	P	L	V	A	L	Y	G	P	S	S	P	D	F	T	P	P	L	.	.	.	S	H	K	A	R	V	I	R	L	I	T	G	Y	H	K	V	R	K	G	D	A	A	E	G	Y	H	Q	S	L	I	D	I	T	P	Q	R	V	L	E	E	L	N
Query Conservation													.																								.	.	.
Alig confidence													.																								.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	H	H	G	G	S	G	T	T	L	G	A	L	G	A	G	V	P	Q	L	S	F	P	W	A	G	D	S	F	A	N	A	Q	A	V	A	Q	A	G	A	G	D	H	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	N	I	S	P	D	S	V	S	G	A	A	K
Template Known Secondary structure					S												T	T									S	T	T											T	T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G		S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.																					.	.	340	.	.	.	.	.	.	.	.	.	350	.
		341	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	L	Q	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	L	A	E	E	S
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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