Job Description P37692 Confidence 90.82% Date Thu Jan 5 11:57:14 GMT 2012 Rank 46 Aligned Residues 256 % Identity 12% Template c3l7mC_ PDB info PDB header:structural protein Chain: C: PDB Molecule:teichoic acid biosynthesis protein f; PDBTitle: structure of the wall teichoic acid polymerase tagf, h548a Resolution 2.85 Å

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		2	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		K	I	L	V	I	G	P	S	W	.	.	V	G	D	M	M	M	S	Q	S	L	Y	R	T	L	Q	A	R	Y	P	Q	A	I	I	D	V	M	A	P	A	W	C	R	P	L	L	S	R	M	P	E	V	N	E	A	I	P	M	P	L	G	H	G	A	L	E	I	G	E	R	R	K	L	G	H	S	L	R	E	K
Query Conservation											.	.
Alig confidence											.	.				.	.																																.	.								.	.	.	.	.	.	.														.	.	.	.
Template Conservation																.	.																																.	.								.	.	.	.	.	.	.														.	.	.	.
Template Sequence		T	I	V	F	E	S	F	G	G	K	N	Y	S	D	.	.	S	P	K	Y	I	Y	E	Y	M	Q	K	Y	Y	P	N	Y	R	Y	I	W	S	F	K	N	P	D	K	N	V	V	P	.	.	G	S	A	E	K	V	K	.	.	.	.	.	.	.	R	N	S	A	E	Y	Y	Q	A	Y	S	E	A	.	.	.	.
Template Known Secondary structure							B	G	G	G	T	B	S			.	.														T	T	S							S	S	G	G	G					.	.	S	S						.	.	.	.	.	.	.	T	T	S											.	.	.	.
Template Predicted Secondary structure																.	.																																.	.								.	.	.	.	.	.	.														.	.	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.			.	400	.	.	.	.	.								.	.	.	.	410	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																								.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Y	D	R	A	Y	V	L	P	N	S	F	K	S	A	L	V	P	F	F	A	G	I	P	H	R	T	G	W	R	G	E	M	R	Y	G	L	L	N	D	V	R	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	E	A	W	P	L	M	V	E	R	Y	I
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.													.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.													.	.
Template Sequence		.	.	S	H	W	V	S	N	A	R	T	P	L	Y	.	.	L	N	K	K	E	N	Q	T	Y	I	Q	T	W	H	G	T	P	L	K	R	L	A	N	D	M	K	V	V	R	M	P	G	T	T	T	P	K	Y	K	R	N	F	N	R	E	T	S	R	W	D	Y	L	I	S	P	N	R	Y	S	T	E	I	F	R
Template Known Secondary structure		.	.						S	S				T	T	.	.	S				T	T	S							S				S	B			G	G	G							T	T															T	T		S					S	S
Template Predicted Secondary structure		.	.													.	.
Template SS confidence
				419	420	.	.	.	.	.	.	.	.	.	430			.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																															.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.
Query Sequence		A	L	A	Y	D	K	G	I	M	R	T	A	Q	D	L	P	Q	P	L	L	W	P	Q	L	Q	V	S	E	G	E	K	S	Y	T	C	N	Q	F	S	L	S	S	E	R	P	M	I	G	F	C	P	G	A	E	F	G	P	A	K	R	W	.	.	.	.	.	.	P	H	Y	H	Y	A	E	L	A	K	Q	L	I
Query Conservation																																																															.	.	.	.	.	.
Alig confidence																																																															.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	F	W	M	D	E	E	R	I	L	E	I	G	Y	P	R	N	D	V	L	V	N	R	A	N	D	Q	E	Y	L	D	E	I	R	T	H	L	N	L	P	S	D	K	K	V	I	M	Y	A	P	T	W	R	D	D	E	F	V	S	K	G	K	Y	L	F	E	L	K	I	D	L	D	N	L	Y	K	E	L	G
Template Known Secondary structure				T	T			G	G	G				S			G	G	G						S	T	T												T	T			S	S												G	G	G			G	G	G	S	S					T	T										T
Template Predicted Secondary structure
Template SS confidence
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	G	Y	Q	V	V	L	F	G	S	A	K	D	H	E	A	G	N	E	I	L	A	A	L	N	T	E	Q	Q	A	W	C	R	N	L	A	G	E	T	Q	L	D	Q	A	V	I	L	I	A	A	C	K	A	I	V	T	N	D	S	G	L	M	H	V	A	A	A	L	N	R	P	L	V	A	L
Query Conservation
Alig confidence		.																			.	.	.	.	.	.																			.	.	.
Template Conservation		.																			.	.	.	.	.	.																			.	.	.
Template Sequence		.	D	D	Y	V	I	L	L	R	M	A	Y	L	I	S	N	A	L	D	.	.	.	.	.	.	L	S	G	Y	E	N	F	A	I	D	V	S	N	Y	N	D	V	S	.	.	.	E	L	F	L	I	S	D	C	L	I	T	D	Y	S	S	V	M	F	D	Y	G	I	L	K	R	P	Q	F	F	F
Template Known Secondary structure		.	T	T													T	T			.	.	.	.	.	.		T	T		T	T	T					T	T		S				.	.	.					T		S					S	S		T	T					G	G	G	T
Template Predicted Secondary structure		.																			.	.	.	.	.	.																			.	.	.
Template SS confidence
			575	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.							.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610				.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions