Job Description P37692 Confidence 98.43% Date Thu Jan 5 11:57:14 GMT 2012 Rank 12 Aligned Residues 277 % Identity 11% Template c2x6rA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:trehalose-synthase tret; PDBTitle: crystal structure of trehalose synthase tret from p.2 horikoshi produced by soaking in trehalose Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.											.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	L	V	I	G	P	S	W	V	G	.	.	D	M	M	M	S	Q	S	L	Y	R	T	L	Q	A	R	Y	P	Q	A	I	I	D	V	M	A	P	A	W	C	R	P	L	L	S	.	.	.	.	.	.	.	.	.	.	R	M	P	E	V	N	E	A	I	P	M	P	L	G	H	G	A	L	E	I	G	E
Query Conservation														.	.																																			.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																.	.																		.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation																															.	.																																		.	.	.	.
Template Sequence		R	S	F	V	H	V	N	S	T	S	F	G	G	G	V	A	E	I	L	H	S	L	V	P	L	L	R	S	I	.	.	G	I	E	A	R	W	F	V	I	E	G	P	T	E	F	F	N	V	T	K	T	F	H	N	A	L	Q	G	N	E	S	L	K	.	.	.	.	L	T	E	E	M	K	E	L	Y	L	N	V
Template Known Secondary structure									S		S	S	S	S	T														T	T	.	.	T																											T		S	S			.	.	.	.
Template Predicted Secondary structure																															.	.																																		.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.						110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		R	R	K	L	G	H	S	L	R	E	K	R	Y	D	R	A	Y	V	L	P	N	S	F	K	S	A	L	V	P	F	F	A	G	I	P	H	R	T	G	W	R	.	.	.	.	.	G	E	M	R	Y	G	L	L	N	D	V	R	V	L	D	K	E	A	W	P	L	M	V	E	R	Y	I	A	L	A	Y	D	K	G
Query Conservation																																											.	.	.	.	.
Alig confidence																																											.	.	.	.	.
Template Conservation
Template Sequence		N	R	E	N	S	K	F	I	D	L	S	S	F	D	Y	V	L	V	H	D	P	Q	P	A	A	L	I	E	F	Y	E	K	K	S	P	W	L	W	R	C	H	I	D	L	S	S	P	N	R	E	F	W	E	F	L	R	R	F	V	E	K	Y	D	R	Y	I	F	H	L	P	E	Y	V	Q	P	E	L	D	R	N
Template Known Secondary structure						T	T	S	S		G	G	G	S	S						S	S	T	T	G	G	G	G	G	G	S				S								S			S	S														T	T	S	S					S	S	G	G	G	S		T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		I	M	R	T	A	Q	D	L	P	Q	P	L	L	W	P	Q	L	Q	V	S	E	G	E	K	S	Y	T	C	N	Q	F	S	L	S	S	E	R	P	M	I	G	F	C	P	G	A	E	F	G	P	A	K	R	W	P	H	Y	H	Y	A	E	L	A	K	Q	L	I	D	E	G	Y	Q	V	V	L	F	G	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																																			.	.											.	.	.
Template Conservation																																																																			.	.
Template Sequence		K	A	V	I	M	P	P	S	I	D	P	L	S	E	K	N	V	E	L	K	Q	T	E	I	L	R	I	L	E	R	F	D	V	D	P	E	K	P	I	I	T	Q	V	S	R	F	D	P	W	K	G	I	F	D	V	I	E	I	Y	R	K	V	K	E	K	.	.	I	P	G	V	Q	L	L	L	V	G	V	M	A
Template Known Secondary structure		T								B		T	T	S	T	T	T	S														T	T			T	T	S										S	T	T	S														T	T	.	.		T	T
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.
				221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270						.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure		.	.																																																			.	.	.	.	.
Query SS confidence		.	.																																																			.	.	.	.	.
Query Sequence		.	.	S	A	K	D	H	E	A	G	N	E	I	L	A	A	L	N	T	E	Q	Q	A	W	C	R	N	L	A	G	E	T	Q	L	D	Q	A	V	I	L	I	A	A	C	K	A	I	V	T	N	D	S	.	.	.	.	.	G	L	M	H	V	A	A	A	L	N	R	P	L	V	A
Query Conservation		.	.																																																			.	.	.	.	.
Alig confidence		.	.																																																			.	.	.	.	.
Template Conservation
Template Sequence		H	D	D	P	E	G	W	I	Y	F	E	K	T	L	R	K	I	G	E	D	Y	D	V	K	V	L	T	N	L	I	G	V	H	A	R	E	V	N	A	F	Q	R	A	S	D	V	I	L	Q	M	S	I	R	E	G	F	G	L	T	V	T	E	A	M	W	K	G	K	P	V	I	G
Template Known Secondary structure		T	T																T	T		T	T						G	G	G	T														S							S	S		S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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