Job Description P37692 Confidence 24.53% Date Thu Jan 5 11:57:14 GMT 2012 Rank 210 Aligned Residues 93 % Identity 16% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		F	S	L	S	S	E	R	P	M	I	G	F	C	P	G	A	E	F	G	P	A	K	R	W	P	H	Y	H	Y	A	E	L	A	K	Q	L	I	D	E	G	Y	Q	V	V	L	F	G	S	A	K	D	H	E	A	G	N	E	I	L	A	A	L	N	T	E	Q	Q	A	W	C	R	N	L	A	G	E	T	Q	.	.
Query Conservation																																																																																.	.
Alig confidence																			.					.	.	.																																																						.	.
Template Conservation																			.					.	.	.
Template Sequence		L	E	L	N	P	K	K	Q	N	V	I	L	L	V	G	I	Q	.	G	S	G	K	.	.	.	T	T	T	A	A	K	L	A	R	Y	I	Q	K	R	G	L	K	P	A	L	I	A	A	D	T	Y	R	P	A	A	Y	E	Q	L	K	Q	L	A	E	K	I	H	V	P	I	Y	G	D	E	T	R	T	K	S	P
Template Known Secondary structure						S	S	S										S	.	S	S	S	T	.	.	.	T																							S				T	T	G	G	G	S	S							S	S							S	S	S			S	S
Template Predicted Secondary structure																			.					.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
					252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	L	D	Q	A	V	I	L	I	A	A	C	K	A	I	V	T	N	D	S	G
Query Conservation		.	.	.
Alig confidence		.	.	.																.
Template Conservation																				.
Template Sequence		V	D	I	V	K	E	G	M	E	K	F	K	K	A	D	V	L	I	.	I	D	T	A
Template Known Secondary structure		S	T	T							T	T	S	S		S				.
Template Predicted Secondary structure																				.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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