Job Description P37692 Confidence 29.78% Date Thu Jan 5 11:57:14 GMT 2012 Rank 173 Aligned Residues 92 % Identity 13% Template c2j37W_ PDB info PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs Resolution 8.00 Å

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	S	S	E	R	P	M	I	G	F	C	P	G	A	E	F	G	P	A	K	R	W	P	H	Y	H	Y	A	E	L	A	K	Q	L	I	D	E	G	Y	Q	V	V	L	F	G	S	A	K	D	H	E	A	G	N	E	I	L	A	A	L	N	T	E	Q	Q	A	W	C	R	N	L	A	G	E	T	Q	L	D	Q
Query Conservation
Alig confidence																		.					.	.	.
Template Conservation																		.					.	.	.
Template Sequence		A	W	T	P	T	K	G	N	V	I	M	F	V	G	L	Q	.	G	S	G	K	.	.	.	T	T	T	C	S	K	L	A	Y	Y	Y	Q	R	K	G	W	K	T	C	L	I	C	A	D	T	F	R	A	G	A	F	D	Q	L	K	Q	N	A	T	K	A	R	I	P	F	Y	G	S	Y	T	E	M	D	P	V	I
Template Known Secondary structure							S	S								S	T	.	T	S	S		.	.	.														T	T											S	S	S														T										S
Template Predicted Secondary structure																		.					.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		255	.	.	.							.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure						.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.
Query Sequence		A	V	I	L	.	.	.	.	.	.	I	A	A	C	K	A	I	V	T	N	D	S	G
Query Conservation						.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.									.
Template Conservation																				.
Template Sequence		I	A	S	E	G	V	E	K	F	K	N	E	N	F	E	I	I	I	.	V	D	T	S
Template Known Secondary structure													T	T						.
Template Predicted Secondary structure																				.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions