Job Description P37692 Confidence 84.45% Date Thu Jan 5 11:57:14 GMT 2012 Rank 54 Aligned Residues 234 % Identity 17% Template c2iv3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycosyltransferase; PDBTitle: crystal structure of avigt4, a glycosyltransferase involved2 in avilamycin a biosynthesis Resolution 2.3 Å

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		1	.	.	.	.	.	.	.	.	10	.																	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	I	L	V	I	G	P	S	W	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	M	M	M	S	Q	S	L	Y	R	T	L	Q	A	R	Y	P	Q	A	I	I	D	V	M	A	P	A	W	C	R	P	L	L	S	R	M	P	E	V	N	E	A	I	P	M	P	L	G	H	G	A	L
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.												.	.	.	.	.							.										.	.	.
Template Conservation																																													.	.												.	.	.	.	.							.										.	.	.
Template Sequence		L	K	V	A	L	V	N	I	P	L	R	V	P	G	S	D	A	W	I	S	V	P	P	Q	G	Y	G	G	I	Q	W	V	V	A	N	L	M	D	G	L	L	E	L	.	.	G	H	E	V	F	L	L	G	A	P	S	.	.	.	.	.	P	G	R	P	G	L	.	T	V	V	P	A	G	E	P	E	.	.	.
Template Known Secondary structure												B		T	T	S	S	S	B			S	S		S	S	S																	T	.	.	T							S				.	.	.	.	.				T	T		.				S			S			.	.	.
Template Predicted Secondary structure																																													.	.												.	.	.	.	.							.										.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.		.	.	.	.	.	.	80	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	G	E	R	R	K	L	G	H	S	L	R	E	K	R	Y	D	R	A	Y	V	L	P	N	S	F	K	S	A	L	V	P	F	F	A	G	I	P	H	R	T	G	W	R	G	E	M	R	Y	G	L	L	N	D	V	R	V	L	D	K	E	A	W	P	L	M	V	E	R	Y	I	A	L	A	Y	D	K	G	I
Query Conservation
Alig confidence		.	.	.	.	.	.																	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	E	I	E	R	W	L	R	T	A	D	V	D	V	V	H	D	.	H	S	G	G	V	I	G	P	A	G	L	P	P	G	T	A	F	I	S	S	H	H	F	T	T	R	P	V	N	P	V	G	C	T	Y	S	S	.	.	.	.	.	.	.	.	.	.	.	.	R	A	Q	R	A	H	C	G
Template Known Secondary structure		.	.	.	.	.	.												S					.		S	S	S	S	S		S	T	T			T	T									S	S	S			S			T	T				S		.	.	.	.	.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure		.	.	.	.	.	.																	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.													.	.	140	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	T	A	Q	D	L	P	Q	P	L	L	W	P	Q	L	Q	V	S	E	G	E	K	S	Y	T	C	N	Q	F	S	L	S	S	E	R	P	M	I	G	F	C	P	G	A	E	F	G	P	A	K	R	W	P	H	Y	H	Y	A	E	L	A	K	Q	L	I	D	E	G	Y	Q	V	V	L	F	G	S	A	K	D
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		G	G	D	D	A	P	V	I	P	I	P	V	D	P	A	R	Y	R	S	A	A	.	.	.	.	.	.	.	.	.	D	Q	V	A	K	E	D	F	L	L	F	M	G	R	V	S	P	H	K	G	.	.	.	.	.	.	.	A	L	E	A	A	A	F	A	H	A	C	G	R	R	L	V	L	A	G	P	A	W	E
Template Known Secondary structure				T	T	S		B					B		G	G	G	S			G	G	.	.	.	.	.	.	.	.	.	G						S						S			S	G	G	G	T	.	.	.	.	.	.	.											T	T							S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.										.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.								.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.												.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	E	A	G	N	E	I	L	A	A	L	N	T	E	Q	Q	A	W	C	R	N	L	A	G	E	T	Q	L	D	Q	A	V	I	L	I	A	A	C	K	A	I	V	T	N	D	S	G	.	.	.	.	.	.	.	.	.	.	.	L	M	H	V	A	A	A	L	N	R	P	L	V	A
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		P	E	Y	F	D	E	I	T	R	R	Y	G	S	.	.	.	.	.	T	V	E	P	I	G	E	V	G	G	E	R	R	L	D	L	L	A	S	A	H	A	V	L	A	M	S	Q	A	V	T	G	I	W	C	E	P	G	A	T	V	V	S	E	A	A	V	S	G	T	P	V	V	G
Template Known Secondary structure													T	T	.	.	.	.	.	T						S														S																	S										T	T
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.						.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions