Job Description P37692 Confidence 94.79% Date Thu Jan 5 11:57:14 GMT 2012 Rank 41 Aligned Residues 114 % Identity 11% Template c1uquB_ PDB info PDB header:synthase Chain: B: PDB Molecule:alpha, alpha-trehalose-phosphate synthase; PDBTitle: trehalose-6-phosphate from e. coli bound with udp-glucose. Resolution 2.0 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.														.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																										.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Q	F	S	L	S	S	E	R	P	M	I	G	F	C	P	G	A	E	F	G	P	A	K	R	W	P	H	Y	H	Y	A	E	L	A	K	Q	L	I	D	.	.	E	G	Y	Q	V	V	L	F	G	S	A	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	A	G	N	E	I	L	A	A	L	N
Query Conservation																																										.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	K	A	E	L	K	N	V	Q	N	I	F	S	V	E	R	L	D	Y	S	K	G	L	P	E	R	F	L	A	Y	E	A	L	L	E	K	Y	P	Q	H	H	G	K	I	R	Y	T	Q	I	A	P	T	S	R	G	D	V	Q	A	Y	Q	D	I	R	H	Q	L	E	N	E	A	G	R	I	N	G	K	Y	G
Template Known Secondary structure		T	S	T	T	T	S	T	T												G	G	G																	G	G	G	T	T	T												T	T	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.		.	.	.	.	280	.	.						.	.	.
Predicted Secondary structure																																		.	.	.	.								.								.	.	.	.	.
Query SS confidence																																		.	.	.	.								.								.	.	.	.	.
Query Sequence		T	E	Q	Q	A	W	C	R	N	L	A	G	E	T	Q	L	D	Q	A	V	I	L	I	A	A	C	K	A	I	V	T	N	.	.	.	.	D	S	G	L	M	H	V	.	A	A	A	L	N	R	P	.	.	.	.	.	L	V	A
Query Conservation																																		.	.	.	.								.								.	.	.	.	.
Alig confidence																																		.	.	.	.								.								.	.	.	.	.
Template Conservation
Template Sequence		Q	L	G	W	T	P	L	Y	Y	L	N	Q	H	F	D	R	K	L	L	M	K	I	F	R	Y	S	D	V	G	L	V	T	P	L	R	D	G	M	N	L	V	A	K	E	Y	V	A	A	Q	D	P	A	N	P	G	V	L	V	L
Template Known Secondary structure		B	T	T	B		S						S															S							S	S	B	S												S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions