 |
Job Description | P27245 | Confidence | 90.34% | Date | Thu Jan 5 11:43:25 GMT 2012 |
Rank | 283 | Aligned Residues | 56 |
% Identity | 13% | Template | d2j5pa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| FtsK C-terminal domain-like
|
Resolution | UNK |
|
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | C | S | I | R | C | A | A | C | I | T | P | V | E | L | K | K | V | L | S | V | D | L | G | A | L | T | R | M | L | D | R | L | V | C | K | G | W | V | E | R | L | P | N | P | N | D | K | R | G | V | L | V | K | L | T |
Query Conservation |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |
|
|
|   |   |
|   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|
|
| . |
|   |   |
|   |   |   |
|
|
|
|   |   |   |   |
Template Sequence |   |
A | V | Q | F | V | T | E | K | R | K | A | S | I | S | G | V | Q | R | Q | F | R | I | G | Y | N | R | A | A | R | I | I | E | Q | M | E | A | Q | G | I | V | S | . |
E | Q | G | H | N | G | N | R | E | V | L | A | P | P | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | B |
| . |
|
|
| S | S | S |  |  |  | B |
| S |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1272 | . | . | . | . | . | . | . | 1280 | . | . | . | . | . | . | . | . | . | 1290 | . | . | . | . | . | . | . | . | . | 1300 | . | . | . | . | . | . | . | . | . | 1310 | . | . | |
. | . | . | . | . | . | . | 1320 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|