Return to main results Retrieve Phyre Job Id

Job DescriptionP27245
Confidence99.92%DateThu Jan 5 11:43:25 GMT 2012
Rank9Aligned Residues128
% Identity23%Templated2fbha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50... ......60.........70.........80.........90..
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Query Sequence  LGRLIHMVNQKKDRLLNEYLSPLDITAAQFKVLCSIRCAA. CITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPND
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Template Sequence  FGTLLAQTSRAWRAELDRRLSHLGLSQARWLVLLHLARHRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAED
Template Known Secondary structure  TGGG

TTT
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BT

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BTT
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   910.........20.........30.........40.........50.........60.........70.........80........
 
   93......100.........110.........120.........130.........140..
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Query Sequence  KRGVLVKLTTGGAAICEQCHQLVGQDLHQELTKNLTADEVATLEYLLKKV
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Template Sequence  RRAKHIVLTPKADVLIADIEAIAAS. VRNDVLTGIDESEQALCQQVLLRI
Template Known Secondary structure  B
S

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   8990.........100.........110... ......120.........130.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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