Return to main results Retrieve Phyre Job Id

Job DescriptionP27245
Confidence99.91%DateThu Jan 5 11:43:25 GMT 2012
Rank17Aligned Residues132
% Identity15%Templated2etha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  IIPLGRLIHMVNQKKDRLLNEYLSPLDITAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNP
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Template Sequence  ALEIFKTLFSLVXRFSSYLPSNEEISDXKTTELYAFLYVALFGPKKXKEIAEFLSTTKSNVTNVVDSLEKRGLVVREXDP
Template Known Secondary structure  TTS


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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   91........100.........110.........120.........130.........140...
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Query Sequence  NDKRGVLVKLTTGGAAICEQCHQLVGQDLHQELTKNLTADEVATLEYLLKKVL
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Template Sequence  VDRRTYRVVLTEKGKEIFGEILSNFES. LLKSVLEKFSEEDFKVVSEGFNRXV
Template Known Secondary structure  TTSS

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   83......90.........100......... 110.........120.........130....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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