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Job DescriptionP27245
Confidence98.17%DateThu Jan 5 11:43:25 GMT 2012
Rank83Aligned Residues91
% Identity20%Templated2esha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QFKVLCSIRCAACITPVELKKVL. . . . . . . . . SVDLGALTRMLDRLVCKGWVERLPNPNDKR. GVLVKLTTGGAAICEQC
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Template Sequence  ASTILLLVAE. KPSHGYELAERLAEFGIEIPGIGHMGNIYRVLADLEESGFLSTEWDTTVSPPRKIYRITPQGKLYLREI
Template Known Secondary structure  .S
B
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   15....20.... .....30.........40.........50.........60.........70.........80.........90...
 
   112.......120.........130.........140...
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Query Sequence  HQLVGQDLHQELTKNLTADEVATLEYLLKKVL
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Template Sequence  LRSLED. MKRRI. . . . . . . . . ETLEERIKRVL
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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