Job Description P27245 Confidence 98.67% Date Thu Jan 5 11:43:25 GMT 2012 Rank 71 Aligned Residues 79 % Identity 19% Template d2d1ha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 2.05

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		36	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		L	D	I	T	A	A	Q	F	K	V	L	C	S	.	I	R	C	A	A	C	I	T	P	V	E	L	K	K	V	L	S	V	D	L	G	A	L	T	R	M	L	D	R	L	V	C	K	G	W	V	E	R	L	P	N	P	N	D	K	R	G	V	L	V	K	L	T	T	G	G	A	A	I	C	E	Q	C	H	Q	L
Query Conservation															.
Alig confidence															.																																											.	.	.
Template Conservation																																																										.	.	.
Template Sequence		Y	K	I	T	D	T	D	V	A	V	L	L	K	X	V	E	I	E	K	P	I	T	S	E	E	L	A	D	I	F	K	L	S	K	T	T	V	E	N	S	L	K	K	L	I	E	L	G	L	V	V	R	T	K	T	P	.	.	.	K	Y	Y	Y	S	I	S	S	N	I	L	E	K	I	R	N	D	L	L	N	C
Template Known Secondary structure			T																	S												T																T	T	S								.	.	.								T	T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		115	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		101	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions