Job Description P27245 Confidence 85.04% Date Thu Jan 5 11:43:25 GMT 2012 Rank 339 Aligned Residues 61 % Identity 10% Template d2b0la1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CodY HTH domain Resolution 2.90

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		38	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		I	T	A	A	Q	F	K	V	L	C	S	I	.	.	.	.	.	R	C	A	A	C	I	T	P	V	E	L	K	K	V	L	S	V	D	L	G	A	L	T	R	M	L	D	R	L	V	C	K	G	W	V	E	R	L	P	N	P	N	D	K	R	G	V	L	V
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.
Template Conservation
Template Sequence		L	S	Y	S	E	L	E	A	I	E	H	I	F	E	E	L	D	G	N	E	G	L	L	V	A	S	K	I	A	D	R	V	G	I	T	R	S	V	I	V	N	A	L	R	K	L	E	S	A	G	V	I	E	S	R	S	L	G	M	K	G	T	Y	I	K	V
Template Known Secondary structure		S												T	T	S	S	B	T	T														T																T	T	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions