Return to main results Retrieve Phyre Job Id

Job DescriptionP27245
Confidence97.78%DateThu Jan 5 11:43:25 GMT 2012
Rank105Aligned Residues46
% Identity11%Templated1z6ra1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ROK associated domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.....
Predicted Secondary structure 








Query SS confidence 













































Query Sequence  AAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVE
Query Conservation       

  
      
   

    
   


  
  
   
 
 
Alig confidence 













































Template Conservation   
   

  
   
  

 


  



  


 

 

   


 
Template Sequence  TNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVHEXLEAHLVQ
Template Known Secondary structure  SS
S

TT

TS
Template Predicted Secondary structure 










Template SS confidence 













































   16...20.........30.........40.........50.........60.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions