Job Description P27245 Confidence 77.08% Date Thu Jan 5 11:43:25 GMT 2012 Rank 399 Aligned Residues 57 % Identity 16% Template d1smyf2 SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution 2.70

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	Q	K	K	D	R	L	L	N	E	Y	L	S	P	L	D	I	T	A	A	Q	F	K	V	L	C	S	I	R	C	A	A	C	I	T	P	V	E	L	K	K	V	L	S	V	D	L	G	A	L	T	R	M	L	D	R	L	V	C	K
Query Conservation
Alig confidence																	.	.															.	.
Template Conservation																	.	.															.	.
Template Sequence		T	Q	S	L	L	S	E	E	L	E	K	A	L	S	K	.	.	L	S	E	R	E	A	M	V	L	K	L	R	K	G	.	.	L	I	D	G	E	E	V	G	A	F	F	G	V	T	R	E	R	I	R	Q	I	E	N	K	A	L	R	K
Template Known Secondary structure															T	T	.	.	S														.	.	T	T					T	T	T	S	S	S	S
Template Predicted Secondary structure																	.	.															.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions