Job Description P27245 Confidence 86.36% Date Thu Jan 5 11:43:25 GMT 2012 Rank 326 Aligned Residues 108 % Identity 14% Template d1r71a_ SCOP info DNA/RNA-binding 3-helical bundle KorB DNA-binding domain-like KorB DNA-binding domain-like Resolution 2.20

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		R	L	L	N	E	Y	L	S	P	L	D	I	T	A	A	Q	.	F	K	V	L	C	S	I	R	C	A	A	C	I	T	P	V	E	L	K	K	V	L	S	V	D	L	G	A	L	T	R	M	L	D	R	L	V	C	K	G	W	V	E	R	L	P	N	P	N	D	K	R	G	V	L	V	K	L	T	T	G	G	A
Query Conservation																		.
Alig confidence																		.													.																																					.	.	.	.	.
Template Conservation																															.																																					.	.	.	.	.
Template Sequence		D	Q	V	I	E	N	L	Q	R	N	E	L	T	P	R	E	I	A	D	F	I	G	R	E	L	A	K	G	K	.	K	K	G	D	I	A	K	E	I	G	K	S	P	A	F	I	T	Q	H	V	T	L	L	D	L	P	E	K	I	A	D	A	F	N	T	G	.	.	.	.	.	R	V	R	D	V	T	V	V	N
Template Known Secondary structure										T	T																	T	T		.										T											G	G	G	S											T	T	.	.	.	.	.	S
Template Predicted Secondary structure																															.																																					.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.						.	.	.	.	210	.	.	.	.
		106	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		A	I	C	E	.	.	Q	C	H	Q	L	V	G	Q	D	L	H	Q	E	L	T	K	N	L	T	A	D	E	V	A	T	L	E	Y	L	L	K
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		E	L	V	T	A	F	K	K	R	P	E	E	V	E	A	W	L	D	D	D	T	Q	E	I	T	R	G	T	V	K	L	L	R	E	F	L	D
Template Known Secondary structure																					T	T				S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions