Return to main results Retrieve Phyre Job Id

Job DescriptionP27245
Confidence58.16%DateThu Jan 5 11:43:25 GMT 2012
Rank476Aligned Residues41
% Identity17%Templated1ldja1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain SCF ubiquitin ligase complex WHB domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.........80.........90.........100
Predicted Secondary structure 









Query SS confidence 











































Query Sequence  PVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKL
Query Conservation     

    
   


  
  
   
 
 
     
 
   
 
Alig confidence 





























...










Template Conservation     
   
      

  

 






 
...
  
   
 

Template Sequence  LTQLSSRFKPRVPVIKKCIDILIEKEYLER. . . VDGEKDTYSYL
Template Known Secondary structure  TTT



TTS...
SSSTT
Template Predicted Secondary structure 







...






Template SS confidence 











































   735....740.........750.........760.... .....770.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions